RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 DDAH2O95865 285 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 USP17L7P0C7H9 530 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 CALM1P0DP23 149 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 CALM2P0DP24 149 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 CALM3P0DP25 149 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 GLRA2P23416 452 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 TUFMP49411 452 aaKnown RBP3.52□□□□□ -1.85
PMS1-215ENST00000447232 TPMTP51580 245 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 KDSRQ06136 332 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 RESTQ13127 1097 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 SRSF6Q13247 344 aaKnown RBP3.52□□□□□ -1.85
PMS1-215ENST00000447232 TESK1Q15569 626 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 ZC2HC1CQ53FD0 456 aaPredicted RBP3.52□□□□□ -1.85
PMS1-215ENST00000447232 JAKMIP3Q5VZ66 844 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 OGFOD2Q6N063 350 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 RHBDF2Q6PJF5 856 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 RSRC2Q7L4I2 434 aaKnown RBP3.52□□□□□ -1.85
PMS1-215ENST00000447232 STK35Q8TDR2 534 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 LRRC15Q8TF66 581 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 HTR3CQ8WXA8 447 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 MRPS31Q92665 395 aaKnown RBP3.52□□□□□ -1.85
PMS1-215ENST00000447232 ZMAT2Q96NC0 199 aaKnown RBP3.52□□□□□ -1.85
PMS1-215ENST00000447232 DEPDC7Q96QD5 511 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 ELF4Q99607 663 aaPredicted RBP3.52□□□□□ -1.85
PMS1-215ENST00000447232 GLT8D2Q9H1C3 349 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 SLC38A7Q9NVC3 462 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 PRMT7Q9NVM4 692 aaPredicted RBP3.52□□□□□ -1.85
PMS1-215ENST00000447232 TUBD1Q9UJT1 453 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 ARHGAP26Q9UNA1 814 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 SATB2Q9UPW6 733 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 GDAQ9Y2T3 454 aa3.52□□□□□ -1.85
PMS1-215ENST00000447232 RP1L1Q8IWN7 2480 aaPredicted RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 NUMA1Q14980 2115 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 NBEAL1Q6ZS30 2694 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 STK36Q9NRP7 1315 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 SOWAHDA6NJG2 315 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 MTSS1O43312 755 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 CSO75390 466 aaKnown RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 PRKCGP05129 697 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 ITGAVP06756 1048 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 JUNBP17275 347 aaPredicted RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 ATP2B1P20020 1258 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 EPHA8P29322 1005 aaPredicted RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 OXTRP30559 389 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 MCM4P33991 863 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 WASP42768 502 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 AARSP49588 968 aaKnown RBP eCLIP3.51□□□□□ -1.85
PMS1-215ENST00000447232 ANTXR2P58335 489 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 INF2Q27J81 1249 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 EGFLAMQ63HQ2 1017 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 EEF1DP3Q658K8 133 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 CDCA2Q69YH5 1023 aaPredicted RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 TMTC3Q6ZXV5 915 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 PLD6Q8N2A8 252 aaKnown RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 SEPT5Q99719 369 aaPredicted RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 PPP4R2Q9NY27 417 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 U3KQE9 123 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 TRAV19A0A0A6YYK7 116 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 TBC1D3BA6NDS4 549 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 hCG_1984214I3L0E3 225 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 VILLO15195 856 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 YKT6O15498 198 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 OPA1O60313 960 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 EDN1P05305 212 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 CKMP06732 381 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 KCNE1P15382 129 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 ABCB4P21439 1286 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 RBMS1P29558 406 aaKnown RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 QARSP47897 775 aaKnown RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 PPP2R3AQ06190 1150 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 BNIP3Q12983 259 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 KIF26BQ2KJY2 2108 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 ZC3H12AQ5D1E8 599 aaKnown RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 PRAMEF14Q5SWL7 426 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 KIAA1324Q6UXG2 1013 aaKnown RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 SPNS3Q6ZMD2 512 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 SLC34A3Q8N130 599 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 ZNF713Q8N859 430 aaPredicted RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 TERB1Q8NA31 727 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 EXOC6Q8TAG9 804 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 GIPC2Q8TF65 315 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 KCNB2Q92953 911 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 NUP58Q9BVL2 599 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 MKRN2Q9H000 416 aaKnown RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 BARHL2Q9NY43 387 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 ACSL6Q9UKU0 697 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 DDX19BQ9UMR2 479 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 TIMM13Q9Y5L4 95 aaPredicted RBP3.51□□□□□ -1.85
PMS1-215ENST00000447232 RAD54BQ9Y620 910 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 PLXNA2O75051 1894 aa3.51□□□□□ -1.85
PMS1-215ENST00000447232 ESPL1Q14674 2120 aa3.5□□□□□ -1.85
PMS1-215ENST00000447232 PMS2P1A4D2B8 440 aa3.5□□□□□ -1.85
PMS1-215ENST00000447232 GFRA2O00451 464 aa3.5□□□□□ -1.85
PMS1-215ENST00000447232 LEFTY1O75610 366 aa3.5□□□□□ -1.85
PMS1-215ENST00000447232 HAPLN1P10915 354 aaPredicted RBP3.5□□□□□ -1.85
PMS1-215ENST00000447232 MARCKSP29966 332 aaPredicted RBP3.5□□□□□ -1.85
PMS1-215ENST00000447232 YWHABP31946 246 aaKnown RBP3.5□□□□□ -1.85
PMS1-215ENST00000447232 KCNAB2Q13303 367 aa3.5□□□□□ -1.85
PMS1-215ENST00000447232 DMP1Q13316 513 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms