RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 FARP1Q9Y4F1 1045 aaPredicted RBP19.06■□□□□ 0.64
SHANK3-203ENST00000445220 KBTBD13C9JR72 458 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 PDGFRBP09619 1106 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 PKNOX1P55347 436 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 HUNKP57058 714 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 PDK4Q16654 411 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 C11orf88Q6PI97 169 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 IKBIPQ70UQ0 350 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 DNAAF5Q86Y56 855 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 SPATA2LQ8IUW3 424 aaPredicted RBP19.06■□□□□ 0.64
SHANK3-203ENST00000445220 POC5Q8NA72 575 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 GMCL1Q96IK5 515 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 TMEM39BQ9GZU3 492 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 WDR41Q9HAD4 459 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 PNPLA3Q9NST1 481 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 UBE2Q2LH0YL09 131 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 SEC24AO95486 1093 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 TGFB2P61812 414 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 TYW3Q6IPR3 259 aaKnown RBP19.06■□□□□ 0.64
SHANK3-203ENST00000445220 UTP15Q8TED0 518 aaKnown RBP19.06■□□□□ 0.64
SHANK3-203ENST00000445220 ATG4CQ96DT6 458 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 DEFB129Q9H1M3 183 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 ARHGEF3Q9NR81 526 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 C6orf203Q9P0P8 240 aaPredicted RBP19.06■□□□□ 0.64
SHANK3-203ENST00000445220 RRN3P2A6NIE6 340 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 MAP3K6O95382 1288 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 ZRANB3Q5FWF4 1079 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 GRTP1Q5TC63 336 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 AMER2Q8N7J2 671 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 FIG4Q92562 907 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 POLR1BQ9H9Y6 1135 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.06■□□□□ 0.643e-6■■■■□ 20.6
SHANK3-203ENST00000445220 C15orf38-AP3S2A0A0A6YYH1 394 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 EFCAB10A6NFE3 127 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 SLC25A3Q00325 362 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 BLMHQ13867 455 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 MYBPC2Q14324 1141 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 ARPINQ7Z6K5 226 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 ETNPPLQ8TBG4 499 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 DRG1Q9Y295 367 aaKnown RBP19.05■□□□□ 0.64
SHANK3-203ENST00000445220 COL3A1P02461 1466 aaPredicted RBP19.05■□□□□ 0.64
SHANK3-203ENST00000445220 MEGF6O75095 1541 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 CCNA2P20248 432 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 GMPSP49915 693 aaPredicted RBP19.05■□□□□ 0.64
SHANK3-203ENST00000445220 CSHL1Q14406 222 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 NFIL3Q16649 462 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 SV2CQ496J9 727 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 LACTB2Q53H82 288 aaPredicted RBP19.05■□□□□ 0.64
SHANK3-203ENST00000445220 ZNF662Q6ZS27 426 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 SFRP1Q8N474 314 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 PIF1Q9H611 641 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 GPAMQ9HCL2 828 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 RGS18Q9NS28 235 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 POLIQ9UNA4 740 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 TK2O00142 265 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 LSM1O15116 133 aaKnown RBP19.05■□□□□ 0.64
SHANK3-203ENST00000445220 LSM8O95777 96 aaKnown RBP19.05■□□□□ 0.64
SHANK3-203ENST00000445220 KLRK1P26718 216 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 GIT2Q14161 759 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 ABRAXAS1Q6UWZ7 409 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 SLC47A2Q86VL8 602 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 TRIM43BA6NCK2 446 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 TPBGLP0DKB5 382 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 MYL4P12829 197 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 FOLH1Q04609 750 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 C11orf74Q86VG3 221 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 CYP4Z1Q86W10 505 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 AVENQ9NQS1 362 aaPredicted RBP19.05■□□□□ 0.64
SHANK3-203ENST00000445220 ZSCAN32Q9NX65 697 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 ENOPH1Q9UHY7 261 aa19.05■□□□□ 0.64
SHANK3-203ENST00000445220 DYNC1LI2O43237 492 aaPredicted RBP19.04■□□□□ 0.64
SHANK3-203ENST00000445220 VPS26AO75436 327 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 ETS1P14921 441 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 CAP2P40123 477 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 ZNF846Q147U1 533 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 TTC23Q5W5X9 447 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 TTC7BQ86TV6 843 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 GMCL1P1Q8NEA9 526 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 DNAJC18Q9H819 358 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 SALL1Q9NSC2 1324 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 IL6P05231 212 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 ADSSP30520 456 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 ZCCHC23Q6ZST2 131 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 CBWD2Q8IUF1 395 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 PIWIL2Q8TC59 973 aaKnown RBP19.04■□□□□ 0.64
SHANK3-203ENST00000445220 TAAR1Q96RJ0 339 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 RTFDC1Q9BY42 306 aaPredicted RBP19.04■□□□□ 0.64
SHANK3-203ENST00000445220 EHD3Q9NZN3 535 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 USP18Q9UMW8 372 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 PSMA3P25788 255 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 PCSK1P29120 753 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 NTRK3Q16288 839 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 TTLL9Q3SXZ7 439 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 DDX3XO00571 662 aaKnown RBP eCLIP19.04■□□□□ 0.64
SHANK3-203ENST00000445220 KATNA1O75449 491 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 MT-CO1P00395 513 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 TAF1CQ15572 869 aaPredicted RBP19.04■□□□□ 0.64
SHANK3-203ENST00000445220 ZFP42Q96MM3 310 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 DUSP9Q99956 384 aaKnown RBP19.04■□□□□ 0.64
SHANK3-203ENST00000445220 ABCB10Q9NRK6 738 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms