RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 TCRBV7S2A1N4TA0A589 114 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 FAM92AA1XBS5 289 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 C2CD4BA6NLJ0 364 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 SASH3O75995 380 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 PTPN7P35236 360 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 PCK1P35558 622 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 SLC25A11Q02978 314 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 LLGL1Q15334 1064 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 PPP1R7Q15435 360 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 SIX1Q15475 284 aaPredicted RBP15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 RAB41Q5JT25 222 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 KAZNQ674X7 775 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 VITQ6UXI7 678 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 SCD5Q86SK9 330 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 CMTM8Q8IZV2 173 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 SIX6OS1Q8N1H7 587 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 SLC44A3Q8N4M1 653 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 ARL14EPQ8N8R7 260 aaPredicted RBP15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 TTC16Q8NEE8 873 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 USP13Q92995 863 aaPredicted RBP15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 CCDC114Q96M63 670 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 HEMGNQ9BXL5 484 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 DPH5Q9H2P9 285 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 LRRC19Q9H756 370 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 CCSER2Q9H7U1 834 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 VIPAS39Q9H9C1 493 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 NMUR1Q9HB89 426 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 LRRC4Q9HBW1 653 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 OSER1Q9NX31 292 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 IGSF9Q9P2J2 1179 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 SORCS3Q9UPU3 1222 aa15.1■□□□□ 0.01
TNFRSF1A-204ENST00000440083 TRAV19A0A0A6YYK7 116 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 HEPACAM2A8MVW5 462 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 MAP2K7O14733 419 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 PAPSS1O43252 624 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 DCXO43602 365 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 PRPSAP2O60256 369 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 ECI2O75521 394 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 GRAP2O75791 330 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 GAS8O95995 478 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 CKMP06732 381 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 ZDHHC11BP0C7U3 371 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 TCF4P15884 667 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 DDX6P26196 483 aaKnown RBP eCLIP15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 TKTL1P51854 596 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 TDGQ13569 410 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 CDO1Q16878 200 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 SMTNL2Q2TAL5 461 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 TFDP3Q5H9I0 405 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 EFHC1Q5JVL4 640 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 TTC27Q6P3X3 843 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 MFSD7Q6UXD7 560 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 SYDE1Q6ZW31 735 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 SLC26A9Q7LBE3 791 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 BHLHA9Q7RTU4 235 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 C1orf54Q8WWF1 131 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 ELSPBP1Q96BH3 223 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 GDAP1L1Q96MZ0 367 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 ERP44Q9BS26 406 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 UBXN6Q9BZV1 441 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 TRIM31Q9BZY9 425 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 DCLK3Q9C098 648 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 RNF38Q9H0F5 515 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 FBXO44Q9H4M3 255 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 EPHX3Q9H6B9 360 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 TRPV4Q9HBA0 871 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 ZFP14Q9HCL3 533 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 COMMD8Q9NX08 183 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 SMPD4Q9NXE4 827 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 PCSK1NQ9UHG2 260 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 FEZ2Q9UHY8 353 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 NUDT5Q9UKK9 219 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 USP18Q9UMW8 372 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 USP3Q9Y6I4 520 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 COL4A3Q01955 1670 aa15.09■□□□□ 0.01
TNFRSF1A-204ENST00000440083 TECTAO75443 2155 aa15.08■□□□□ 0.01
TNFRSF1A-204ENST00000440083 hCG_1818297A0A087WSY0 165 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 SCAMP3O14828 347 aaKnown RBP15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 MDM4O15151 490 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 DAPK3O43293 454 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 TRUB2O95900 331 aaKnown RBP15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 OAS1P00973 400 aaKnown RBP15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 MIPP30301 263 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 FLT3P36888 993 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 AVPR1AP37288 418 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 PTGIRP43119 386 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 RPL34P49207 117 aaKnown RBP15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 ZXDAP98168 799 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 LMNB2Q03252 620 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 SNX1Q13596 522 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 ATP13A4Q4VNC1 1196 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 IER5LQ5T953 404 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 SCUBE3Q8IX30 993 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 KCTD6Q8NC69 237 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 PDZD8Q8NEN9 1154 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 CLEC4CQ8WTT0 213 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 OVCA2Q8WZ82 227 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 HSPH1Q92598 858 aa15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 PIWIL1Q96J94 861 aaKnown RBP15.08■□□□□ 0
TNFRSF1A-204ENST00000440083 RUFY1Q96T51 708 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms