RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 SFSWAPQ12872 951 aaKnown RBP11.71□□□□□ -0.53
RTN4-211ENST00000438462 C20orf194Q5TEA3 1177 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 TMEM215Q68D42 235 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 CCDC83Q8IWF9 413 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 IL22RA1Q8N6P7 574 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 GOLGA1Q92805 767 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 CCDC3Q9BQI4 270 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 NEUROG2Q9H2A3 272 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 SEMA6CQ9H3T2 930 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 CCSER2Q9H7U1 834 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 KLHL11Q9NVR0 708 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 RRN3Q9NYV6 651 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 CA5BQ9Y2D0 317 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 TNRC6AQ8NDV7 1962 aaKnown RBP11.7□□□□□ -0.54
RTN4-211ENST00000438462 NTN3O00634 580 aaPredicted RBP11.7□□□□□ -0.54
RTN4-211ENST00000438462 TOM1L1O75674 476 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 PPP1R37O75864 691 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 SORBS2O94875 1100 aaKnown RBP11.7□□□□□ -0.54
RTN4-211ENST00000438462 PDGFAP04085 211 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 XRCC6P12956 609 aaKnown RBP eCLIP11.7□□□□□ -0.54
RTN4-211ENST00000438462 BDNFP23560 247 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 ADPRHP54922 357 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 NOP14P78316 857 aaKnown RBP11.7□□□□□ -0.54
RTN4-211ENST00000438462 KCNMA1Q12791 1236 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 NR0B2Q15466 257 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 INPP5JQ15735 1006 aaPredicted RBP11.7□□□□□ -0.54
RTN4-211ENST00000438462 POM121L1PQ3SYA9 428 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 HTR3DQ70Z44 454 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 PDCL2Q8N4E4 241 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 MYLPFQ96A32 169 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 PIWIL1Q96J94 861 aaKnown RBP11.7□□□□□ -0.54
RTN4-211ENST00000438462 CEP295NLQ96MC4 621 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 EPAS1Q99814 870 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 HAPLN2Q9GZV7 340 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 GSX1Q9H4S2 264 aaPredicted RBP11.7□□□□□ -0.54
RTN4-211ENST00000438462 TMEM134Q9H6X4 195 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 CBX8Q9HC52 389 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 NCKIPSDQ9NZQ3 722 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 MAP10Q9P2G4 905 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 PCDHA4Q9UN74 947 aa11.7□□□□□ -0.54
RTN4-211ENST00000438462 NYNRINQ9P2P1 1898 aaKnown RBP11.7□□□□□ -0.54
RTN4-211ENST00000438462 CSPG4Q6UVK1 2322 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 STAB1Q9NY15 2570 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 D6RAR5 112 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 TMX2-CTNND1H3BSU7 103 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 M0R2N6 131 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 MID1O15344 667 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 PRPF3O43395 683 aaKnown RBP11.69□□□□□ -0.54
RTN4-211ENST00000438462 LATO43561 262 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 CCNT1O60563 726 aaKnown RBP11.69□□□□□ -0.54
RTN4-211ENST00000438462 JAK2O60674 1132 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 RNASEH2AO75792 299 aaKnown RBP11.69□□□□□ -0.54
RTN4-211ENST00000438462 CLCN1P35523 988 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 MATR3P43243 847 aaKnown RBP eCLIP11.69□□□□□ -0.542e-7■■□□□ 13.8
RTN4-211ENST00000438462 PEX3P56589 373 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 STAT4Q14765 748 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 ZRANB3Q5FWF4 1079 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 HECTD3Q5T447 861 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 TDRD10Q5VZ19 366 aaKnown RBP11.69□□□□□ -0.54
RTN4-211ENST00000438462 VSTM1Q6UX27 236 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 PRIMA1Q86XR5 153 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 KCTD17Q8N5Z5 321 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 GPBAR1Q8TDU6 330 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 CYB5D2Q8WUJ1 264 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 PPP1R13BQ96KQ4 1090 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 MFRPQ9BY79 579 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 NACA2Q9H009 215 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 ARHGAP28Q9P2N2 729 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 SCML1Q9UN30 329 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 L1RE1Q9UN81 338 aa11.69□□□□□ -0.54
RTN4-211ENST00000438462 ARHGEF35A5YM69 484 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 KPNA7A9QM74 516 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 PENKP01210 267 aaPredicted RBP11.68□□□□□ -0.54
RTN4-211ENST00000438462 SNRPB2P08579 225 aaKnown RBP11.68□□□□□ -0.54
RTN4-211ENST00000438462 GCFC2P16383 781 aaKnown RBP11.68□□□□□ -0.54
RTN4-211ENST00000438462 ITGB7P26010 798 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 MAT2AP31153 395 aaKnown RBP11.68□□□□□ -0.54
RTN4-211ENST00000438462 CCKBRP32239 447 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 NPTX2P47972 431 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
RTN4-211ENST00000438462 MCL1Q07820 350 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 EHHADHQ08426 723 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 TMEM132DQ14C87 1099 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 NR6A1Q15406 480 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 SV2CQ496J9 727 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 NADK2Q4G0N4 442 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 ZNF542PQ5EBM4 170 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 C4orf50Q6ZRC1 276 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 OSTM1Q86WC4 334 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 SLFN12Q8IYM2 578 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 ZNF548Q8NEK5 533 aaPredicted RBP11.68□□□□□ -0.54
RTN4-211ENST00000438462 KIFAP3Q92845 792 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 KLHDC7BQ96G42 594 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 SLC45A3Q96JT2 553 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 RSPH9Q9H1X1 276 aaPredicted RBP11.68□□□□□ -0.54
RTN4-211ENST00000438462 ARHGAP20Q9P2F6 1191 aa11.68□□□□□ -0.54
RTN4-211ENST00000438462 MAGEC2Q9UBF1 373 aaPredicted RBP11.68□□□□□ -0.54
RTN4-211ENST00000438462 LSM7Q9UK45 103 aaKnown RBP11.68□□□□□ -0.54
RTN4-211ENST00000438462 FZD4Q9ULV1 537 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms