RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 AGPAT5Q9NUQ2 364 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 ARHGEF40Q8TER5 1519 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 A0A087X1B8 175 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 KCNH1O95259 989 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 SERPINA1P01009 418 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 S100A2P29034 98 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 HOXA13P31271 388 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-209ENST00000437951 CBX3Q13185 183 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 CCNIQ14094 377 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 CCNG2Q16589 344 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 FAM187BQ17R55 369 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 OTUD3Q5T2D3 398 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-209ENST00000437951 KCTD10Q9H3F6 313 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 PRDM16Q9HAZ2 1276 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 CRLS1Q9UJA2 301 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 SYNPO2Q9UMS6 1093 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 BAZ2BQ9UIF8 2168 aaKnown RBP11.79□□□□□ -0.52
PTCH1-209ENST00000437951 PTENP60484 403 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 SNRNP35Q16560 246 aaKnown RBP11.79□□□□□ -0.52
PTCH1-209ENST00000437951 MFSD14CQ5VZR4 134 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 IRX2Q9BZI1 471 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-209ENST00000437951 WDR41Q9HAD4 459 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 SEC31BQ9NQW1 1179 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 HOXC10Q9NYD6 342 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 LOC110117498-PIK3R3F6TDL0 507 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 UNC5CO95185 931 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 SDC2P34741 201 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 MYL6P60660 151 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 SPANXN3Q5MJ09 141 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 HDAC7Q8WUI4 952 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 CLCC1Q96S66 551 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 NDNQ99608 321 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 MUC3BQ9H195 1237 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 SNAP23O00161 211 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 KRT36O76013 467 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 MSL3P1P0C860 447 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 SOX11P35716 441 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 ZNF112Q9UJU3 913 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 MKLN1Q9UL63 735 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 SMCO3A2RU48 225 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 ASMTLO95671 621 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 TMEM132DQ14C87 1099 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 CD302Q8IX05 232 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 EMC1Q8N766 993 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 SLC30A5Q8TAD4 765 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 STX16-NPEPL1H3BU86 382 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 STX16O14662 325 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 RIPK2O43353 540 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 ZC3H11AO75152 810 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTCH1-209ENST00000437951 CAMTA2O94983 1202 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 RTN3O95197 1032 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-209ENST00000437951 THRBP10828 461 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 FCER1AP12319 257 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 GZMAP12544 262 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 BGNP21810 368 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 SV2CQ496J9 727 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 SLC44A2Q8IWA5 706 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-209ENST00000437951 PIK3R3Q92569 461 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 AIFM3Q96NN9 605 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 CITED4Q96RK1 184 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 STRBPQ96SI9 672 aaKnown RBP11.79□□□□□ -0.52
PTCH1-209ENST00000437951 DPY30Q9C005 99 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 C12orf4Q9NQ89 552 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 PLAGL2Q9UPG8 496 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 TBC1D30Q9Y2I9 924 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 SAMD9LQ8IVG5 1584 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 EIF5AP63241 154 aaKnown RBP11.79□□□□□ -0.52
PTCH1-209ENST00000437951 RABL6Q3YEC7 729 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-209ENST00000437951 ULK3Q6PHR2 472 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 BHLHE22Q8NFJ8 381 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-209ENST00000437951 SEPHS2Q99611 448 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 MUC13Q9H3R2 512 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 LIMD1Q9UGP4 676 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 GPN3Q9UHW5 284 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-209ENST00000437951 RAB26Q9ULW5 256 aa11.79□□□□□ -0.52
PTCH1-209ENST00000437951 DGAT1O75907 488 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 SLC5A9Q2M3M2 681 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 TMC2Q8TDI7 906 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 KLF6Q99612 283 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-209ENST00000437951 CINPQ9BW66 212 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-209ENST00000437951 PCDH9Q9HC56 1237 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 MAN1C1Q9NR34 630 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 CHORDC1Q9UHD1 332 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-209ENST00000437951 NPR2P20594 1047 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 KLHDC7AQ5VTJ3 777 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 MB21D2Q8IYB1 491 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-209ENST00000437951 OR52L1Q8NGH7 329 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 SPATA5L1Q9BVQ7 753 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 EMILIN2Q9BXX0 1053 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 SHCBP1LQ9BZQ2 653 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 TBX22Q9Y458 520 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 TRIM17Q9Y577 477 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 GNG14A0A1W2PPG7 69 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 CCDC189A1A4V9 331 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 MOCS2O96007 188 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-209ENST00000437951 ZNF806P0C7X5 589 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 CDH4P55283 916 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 TWF1Q12792 350 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 PLET1Q6UQ28 207 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms