RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 CEP128Q6ZU80 1094 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNHG20-202ENST00000434411 FUKQ8N0W3 1084 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 UBR7Q8N806 425 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 PPP1R14CQ8TAE6 165 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 SKA1Q96BD8 255 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 CHMP6Q96FZ7 201 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 FAM84AQ96KN4 292 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 TGS1Q96RS0 853 aaKnown RBP12.53□□□□□ -0.4
SNHG20-202ENST00000434411 IL20Q9NYY1 176 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNHG20-202ENST00000434411 PADI3Q9ULW8 664 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 COL6A3P12111 3177 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 LINC01553A4QN01 128 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 ENPP3O14638 875 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 FSCN2O14926 492 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 KLHL41O60662 606 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 LUC7L3O95232 432 aaKnown RBP12.53□□□□□ -0.4
SNHG20-202ENST00000434411 GAS8O95995 478 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 CST3P01034 146 aaPredicted RBP12.53□□□□□ -0.4
SNHG20-202ENST00000434411 KRT19P08727 400 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 CD58P19256 250 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 DRD4P21917 467 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 HAAOP46952 286 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 KCNJ1P48048 391 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 NR2C2P49116 596 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 MXRA7P84157 204 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 CALCOCO2Q13137 446 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 ADGRE1Q14246 886 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 PPP1R7Q15435 360 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 C6orf118Q5T5N4 469 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 UBAP2Q5T6F2 1119 aaKnown RBP12.53□□□□□ -0.4
SNHG20-202ENST00000434411 DUS1LQ6P1R4 473 aaKnown RBP12.53□□□□□ -0.4
SNHG20-202ENST00000434411 CROCCP2Q86T23 111 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 ZNF410Q86VK4 478 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 NLRP7Q8WX94 980 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 STAMBPL1Q96FJ0 436 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 SMC6Q96SB8 1091 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 PRPF18Q99633 342 aaKnown RBP12.53□□□□□ -0.4
SNHG20-202ENST00000434411 LRRC19Q9H756 370 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 AGO3Q9H9G7 860 aaKnown RBP12.53□□□□□ -0.4
SNHG20-202ENST00000434411 PCDHGC3Q9UN70 934 aa12.53□□□□□ -0.4
SNHG20-202ENST00000434411 LRRD1A4D1F6 860 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 CDK2AP1O14519 115 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 GPR182O15218 404 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 CXCL8P10145 99 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 MMP8P22894 467 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 HSD17B2P37059 387 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 MMP13P45452 471 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 CRYBB1P53674 252 aaPredicted RBP12.52□□□□□ -0.4
SNHG20-202ENST00000434411 OSTNP61366 133 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 IFI35P80217 286 aaPredicted RBP12.52□□□□□ -0.4
SNHG20-202ENST00000434411 NFX1Q12986 1120 aaKnown RBP12.52□□□□□ -0.4
SNHG20-202ENST00000434411 MAMLD1Q13495 774 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 LLGL1Q15334 1064 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 SIX1Q15475 284 aaPredicted RBP12.52□□□□□ -0.4
SNHG20-202ENST00000434411 NEK5Q6P3R8 708 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 DNAJC24Q6P3W2 148 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 CCDC25Q86WR0 208 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 FEZF2Q8TBJ5 459 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 SLCO2A1Q92959 643 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 ART4Q93070 314 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 SAMD11Q96NU1 681 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 OSBPL1AQ9BXW6 950 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 GBA3Q9H227 469 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 ACTR5Q9H9F9 607 aaPredicted RBP12.52□□□□□ -0.4
SNHG20-202ENST00000434411 PFDN4Q9NQP4 134 aa12.52□□□□□ -0.4
SNHG20-202ENST00000434411 TMA7Q9Y2S6 64 aaKnown RBP12.52□□□□□ -0.4
SNHG20-202ENST00000434411 COL4A6Q14031 1691 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 A0A087WZ62 844 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 SPTLC1O15269 473 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 B4GALT5O43286 388 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 RIPK2O43353 540 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 ACSL4O60488 711 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 RNGTTO60942 597 aaKnown RBP12.52□□□□□ -0.41
SNHG20-202ENST00000434411 ARHGEF15O94989 841 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 AGTP01019 485 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 CDK4P11802 303 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 RARGP13631 454 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 POU3F3P20264 500 aaPredicted RBP12.52□□□□□ -0.41
SNHG20-202ENST00000434411 SLCO1A2P46721 670 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 ERVK-21P61565 698 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 ANKRD39Q53RE8 183 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 ARMC4Q5T2S8 1044 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 SDE2Q6IQ49 451 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 DCUN1D2Q6PH85 259 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 ZNF600Q6ZNG1 722 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 KATNAL2Q8IYT4 538 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 SP7Q8TDD2 431 aaPredicted RBP12.52□□□□□ -0.41
SNHG20-202ENST00000434411 WDR60Q8WVS4 1066 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 FERD3LQ96RJ6 166 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 FDXACB1Q9BRP7 624 aaPredicted RBP12.52□□□□□ -0.41
SNHG20-202ENST00000434411 ATPIF1Q9UII2 106 aa12.52□□□□□ -0.41
SNHG20-202ENST00000434411 CDH23Q9H251 3354 aa12.51□□□□□ -0.41
SNHG20-202ENST00000434411 RFXAPO00287 272 aa12.51□□□□□ -0.41
SNHG20-202ENST00000434411 DGKIO75912 1065 aa12.51□□□□□ -0.41
SNHG20-202ENST00000434411 CALCAP01258 141 aa12.51□□□□□ -0.41
SNHG20-202ENST00000434411 VTNP04004 478 aa12.51□□□□□ -0.41
SNHG20-202ENST00000434411 STAG3L1P0CL83 205 aa12.51□□□□□ -0.41
SNHG20-202ENST00000434411 CDH5P33151 784 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms