RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 GATA6Q92908 595 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 TMA16Q96EY4 203 aaKnown RBP14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 GSDMAQ96QA5 445 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 C6orf106Q9H6K1 298 aaPredicted RBP14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 ACP6Q9NPH0 428 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 IGF2RP11717 2491 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 GOLGA8CPA6NN73 597 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 GNSP15586 552 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 HOXD12P35452 270 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 BNC1Q01954 994 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 ENPP2Q13822 863 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 ADIPOR2Q86V24 386 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 MARCH9Q86YJ5 346 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 CFAP52Q8N1V2 620 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 CCDC34Q96HJ3 373 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 NT5C1BQ96P26 610 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 ABCC13Q9NSE7 274 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 OLA1Q9NTK5 396 aaKnown RBP14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 GGA2Q9UJY4 613 aa14.85□□□□□ -0.03
SMARCE1-205ENST00000431889 GADD45BO75293 160 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 MOCS2O96007 188 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 DPP6P42658 865 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 CSNK1EP49674 416 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 LRRC63Q05C16 580 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 PTPRNQ16849 979 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 WDR45BQ5MNZ6 344 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 MBLAC2Q68D91 279 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 NADSYN1Q6IA69 706 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 LCLAT1Q6UWP7 414 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 NAXDQ8IW45 347 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 SCUBE3Q8IX30 993 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 SPATA20Q8TB22 786 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 SETD7Q8WTS6 366 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 SLC35F5Q8WV83 523 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 NELFBQ8WX92 580 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 FOXJ1Q92949 421 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 PRICKLE1Q96MT3 831 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 ST7Q9NRC1 585 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 DNAAF2Q9NVR5 837 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 XPO7Q9UIA9 1087 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 NAALADL1Q9UQQ1 740 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 FNDC3AQ9Y2H6 1198 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 HBS1LQ9Y450 684 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 CHD6Q8TD26 2715 aa14.84□□□□□ -0.03
SMARCE1-205ENST00000431889 A0A1B0GVT2 93 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 FAM47DPA6NHR8 397 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 PSMA7O14818 248 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 GJB3O75712 270 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 SETSIPP0DME0 302 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 PABPC1P11940 636 aaKnown RBP14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 YWHAEP62258 255 aaKnown RBP14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 RPS24P62847 133 aaKnown RBP14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 APBA1Q02410 837 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 TRIP6Q15654 476 aaKnown RBP14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 FAM133BQ5BKY9 247 aaKnown RBP14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 ADGRF1Q5T601 910 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 DENND1BQ6P3S1 775 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 GJB7Q6PEY0 223 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 CREBRFQ8IUR6 639 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 OR2T3Q8NH03 318 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 LMO3Q8TAP4 145 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 ZCCHC14Q8WYQ9 949 aaKnown RBP14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 KCTD13Q8WZ19 329 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 FAXDC2Q96IV6 333 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 KREMEN1Q96MU8 473 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 TMEM245Q9H330 911 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 FAM124BQ9H5Z6 455 aaPredicted RBP14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 GAREM1Q9H706 876 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 PRSS16Q9NQE7 514 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 CNGB3Q9NQW8 809 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 PLA2G4CQ9UP65 541 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 PCDHB9Q9Y5E1 797 aa14.83□□□□□ -0.04
SMARCE1-205ENST00000431889 A0A1B0GTW7 788 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 METTL12A8MUP2 240 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 PPP1R3GB7ZBB8 358 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 BCAT2O15382 392 aaPredicted RBP14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 LTFP02788 710 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 FYNP06241 537 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 KRT5P13647 590 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 TBXAS1P24557 533 aaPredicted RBP14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 CTSOP43234 321 aaPredicted RBP14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 TBX4P57082 545 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 IL9RQ01113 521 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 COBLL1Q53SF7 1204 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 FSCBQ5H9T9 825 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 TTI2Q6NXR4 508 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 CARNMT1Q8N4J0 409 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 DNASE2BQ8WZ79 361 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 NUP58Q9BVL2 599 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 SLC2A11Q9BYW1 496 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 NUCKS1Q9H1E3 243 aaKnown RBP14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 LHX5Q9H2C1 402 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 TJP2Q9UDY2 1190 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 PLXNA2O75051 1894 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 NBEAQ8NFP9 2946 aa14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 TP53BP1Q12888 1972 aaPredicted RBP14.82□□□□□ -0.04
SMARCE1-205ENST00000431889 ACSL4O60488 711 aa14.81□□□□□ -0.04
SMARCE1-205ENST00000431889 FSBPO95073 299 aa14.81□□□□□ -0.04
SMARCE1-205ENST00000431889 RPS14P62263 151 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms