RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PLCH1Q4KWH8 1693 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 SMIM35A0A1B0GVV1 85 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 PI4KAP2A4QPH2 592 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 GRM8O00222 908 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 CTAGE5O15320 804 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 PHGDHO43175 533 aaKnown RBP5.62□□□□□ -1.51
LINC00458-202ENST00000427299 VPS4BO75351 444 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 KIF20AO95235 890 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 ADCY5O95622 1261 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 RARBP10826 455 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 PEX2P28328 305 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 NR4A2P43354 598 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 ALDH9A1P49189 494 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 ARFIP2P53365 341 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 EEFSECP57772 596 aaKnown RBP5.62□□□□□ -1.51
LINC00458-202ENST00000427299 LAMB3Q13751 1172 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 SYCP1Q15431 976 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 KLHL22Q53GT1 634 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 ATL3Q6DD88 541 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 CATSPERGQ6ZRH7 1159 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 WDR53Q7Z5U6 358 aaPredicted RBP5.62□□□□□ -1.51
LINC00458-202ENST00000427299 AACSQ86V21 672 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 UNC5CLQ8IV45 518 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 SMAP1Q8IYB5 467 aaPredicted RBP5.62□□□□□ -1.51
LINC00458-202ENST00000427299 GALNT16Q8N428 558 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 PI4KAP1Q8N8J0 262 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 IL17REQ8NFR9 667 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 PKNOX2Q96KN3 472 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 TINAGL1Q9GZM7 467 aaPredicted RBP5.62□□□□□ -1.51
LINC00458-202ENST00000427299 BTBD1Q9H0C5 482 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 SIK2Q9H0K1 926 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 VPS16Q9H269 839 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 ZSCAN16Q9H4T2 348 aaPredicted RBP5.62□□□□□ -1.51
LINC00458-202ENST00000427299 TUBA8Q9NY65 449 aaPredicted RBP5.62□□□□□ -1.51
LINC00458-202ENST00000427299 FEZ2Q9UHY8 353 aaPredicted RBP5.62□□□□□ -1.51
LINC00458-202ENST00000427299 MTMR6Q9Y217 621 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 CNPY2Q9Y2B0 182 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 PCDHGB6Q9Y5F9 930 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 SH3TC1Q8TE82 1336 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 ZNF609O15014 1411 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 TIAM2Q8IVF5 1701 aa5.62□□□□□ -1.51
LINC00458-202ENST00000427299 CYP2D7A0A087X1C5 515 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 CFAP69A5D8W1 941 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 QSOX1O00391 747 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 LRP5O75197 1615 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 DNAJB5O75953 348 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 IL6RP08887 468 aaPredicted RBP5.61□□□□□ -1.51
LINC00458-202ENST00000427299 NPR1P16066 1061 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 EIF2S2P20042 333 aaKnown RBP5.61□□□□□ -1.51
LINC00458-202ENST00000427299 RPS6KB1P23443 525 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 SMARCA1P28370 1054 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 CYP2C18P33260 490 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 LIPAP38571 399 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 GCLCP48506 637 aaPredicted RBP5.61□□□□□ -1.51
LINC00458-202ENST00000427299 PIK3CGP48736 1102 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 KIF22Q14807 665 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 GPR162Q16538 588 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 GRAMD1BQ3KR37 738 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 CCDC157Q569K6 752 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 KRT73Q86Y46 540 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 BICD2Q8TD16 824 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 PHKBQ93100 1093 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 GJA10Q969M2 543 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 MTFMTQ96DP5 389 aaKnown RBP5.61□□□□□ -1.51
LINC00458-202ENST00000427299 ABCC12Q96J65 1359 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 LLPHQ9BRT6 129 aaKnown RBP5.61□□□□□ -1.51
LINC00458-202ENST00000427299 FUCA2Q9BTY2 467 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 CCDC94Q9BW85 323 aaPredicted RBP5.61□□□□□ -1.51
LINC00458-202ENST00000427299 C1orf43Q9BWL3 253 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 DPH1Q9BZG8 443 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 TNMDQ9H2S6 317 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 PTPRHQ9HD43 1115 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 CFAP45Q9UL16 551 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 ZDHHC8Q9ULC8 765 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 SH2B3Q9UQQ2 575 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 PCDHA1Q9Y5I3 950 aa5.61□□□□□ -1.51
LINC00458-202ENST00000427299 LAMB1P07942 1786 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 NWD2Q9ULI1 1742 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 KCNU1A8MYU2 1149 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 ISM1B1AKI9 464 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 GOLGA6L19H0YKK7 550 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 H3BQV1 296 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 KIF2AO00139 706 aaPredicted RBP5.6□□□□□ -1.51
LINC00458-202ENST00000427299 RNMTO43148 476 aaKnown RBP5.6□□□□□ -1.51
LINC00458-202ENST00000427299 PQBP1O60828 265 aaKnown RBP5.6□□□□□ -1.51
LINC00458-202ENST00000427299 FGAP02671 866 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 RPL17P18621 184 aaKnown RBP5.6□□□□□ -1.51
LINC00458-202ENST00000427299 SERPINB3P29508 390 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 CCKBRP32239 447 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 PIK3CBP42338 1070 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 MMP13P45452 471 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 TPM4P67936 248 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 CYP4F2P78329 520 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 BOP1Q14137 746 aaKnown RBP5.6□□□□□ -1.51
LINC00458-202ENST00000427299 DAZAP2Q15038 168 aaPredicted RBP5.6□□□□□ -1.51
LINC00458-202ENST00000427299 NECTIN1Q15223 517 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 STX1AQ16623 288 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 CCDC73Q6ZRK6 1079 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 RBM43Q6ZSC3 357 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms