RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 CLEC20AQ6ZU45 233 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 USP30Q70CQ3 517 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 CCDC186Q7Z3E2 898 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 BRAPQ7Z569 592 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 C12orf29Q8N999 325 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 XXYLT1Q8NBI6 393 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 ZNF516Q92618 1163 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 TTC9Q92623 222 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 MED8Q96G25 268 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 HIC2Q96JB3 615 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 SDCBP2Q9H190 292 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 AGPAT3Q9NRZ7 376 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 CLIC5Q9NZA1 410 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 SUN2Q9UH99 717 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 STRIP2Q9ULQ0 834 aa14.84□□□□□ -0.03
HDAC6-206ENST00000426196 UBR5O95071 2799 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-206ENST00000426196 LRRC72A6NJI9 287 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 HHLA1C9JL84 531 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 EIF3DO15371 548 aaKnown RBP eCLIP14.83□□□□□ -0.04
HDAC6-206ENST00000426196 STX6O43752 255 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 ACP1P24666 158 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 GJB2P29033 226 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 E2F1Q01094 437 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 NCOA4Q13772 614 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 MPPE1Q53F39 396 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 SLC45A4Q5BKX6 768 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 SFMBT2Q5VUG0 894 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 NCEH1Q6PIU2 408 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 CHST9Q7L1S5 443 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 PRICKLE2Q7Z3G6 844 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 UNC93AQ86WB7 457 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 LSMEM2Q8N112 164 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 AHI1Q8N157 1196 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 CRYBG2Q8N1P7 616 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 KCNE4Q8WWG9 221 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 PABPC3Q9H361 631 aaKnown RBP14.83□□□□□ -0.04
HDAC6-206ENST00000426196 FBXL12Q9NXK8 326 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 HMGXB4Q9UGU5 601 aa14.83□□□□□ -0.04
HDAC6-206ENST00000426196 TDRD6O60522 2096 aaKnown RBP14.82□□□□□ -0.04
HDAC6-206ENST00000426196 CLIC2O15247 247 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 KLK10O43240 276 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 RNASEH1O60930 286 aaKnown RBP14.82□□□□□ -0.04
HDAC6-206ENST00000426196 MT-CO3P00414 261 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 ATP5BP06576 529 aaKnown RBP14.82□□□□□ -0.04
HDAC6-206ENST00000426196 DLDP09622 509 aaKnown RBP14.82□□□□□ -0.04
HDAC6-206ENST00000426196 HOXD9P28356 352 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-206ENST00000426196 HLA-FP30511 346 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 HOXD13P35453 343 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 RXRGP48443 463 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 KIF11P52732 1056 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 AP3M2P53677 418 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 GALCP54803 685 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 VAC14Q08AM6 782 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 SCD5Q86SK9 330 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 HNRNPABQ99729 332 aaKnown RBP14.82□□□□□ -0.04
HDAC6-206ENST00000426196 DPH1Q9BZG8 443 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 ERVMER34-1Q9H9K5 563 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 ABCB8Q9NUT2 735 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 MARCH2Q9P0N8 246 aa14.82□□□□□ -0.04
HDAC6-206ENST00000426196 A0A1W2PR77 199 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 TLR4O00206 839 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 NXPH1P58417 271 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 ZNF445P59923 1031 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 ERVPABLB-1P60509 514 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 SNRPFP62306 86 aaKnown RBP14.81□□□□□ -0.04
HDAC6-206ENST00000426196 GABREP78334 506 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 SRSF1Q07955 248 aaKnown RBP eCLIP14.81□□□□□ -0.04
HDAC6-206ENST00000426196 BNIP3Q12983 259 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 RSRC2Q7L4I2 434 aaKnown RBP14.81□□□□□ -0.04
HDAC6-206ENST00000426196 FAM217AQ8IXS0 508 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 OR2T34Q8NGX1 318 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 SNRNP27Q8WVK2 155 aaKnown RBP14.81□□□□□ -0.04
HDAC6-206ENST00000426196 HPS3Q969F9 1004 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 PLD4Q96BZ4 506 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 SERAC1Q96JX3 654 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 GZF1Q9H116 711 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-206ENST00000426196 RSPH9Q9H1X1 276 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-206ENST00000426196 EBF2Q9HAK2 575 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 GGA2Q9UJY4 613 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 TPX2Q9ULW0 747 aaKnown RBP14.81□□□□□ -0.04
HDAC6-206ENST00000426196 PCDHB1Q9Y5F3 818 aa14.81□□□□□ -0.04
HDAC6-206ENST00000426196 TLN1Q9Y490 2541 aaKnown RBP14.8□□□□□ -0.04
HDAC6-206ENST00000426196 SLC12A8A0AV02 714 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 TGFB1I1O43294 461 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 DXOO77932 396 aaKnown RBP14.8□□□□□ -0.04
HDAC6-206ENST00000426196 KIF20AO95235 890 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 MPOP05164 745 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 PABPC1P11940 636 aaKnown RBP14.8□□□□□ -0.04
HDAC6-206ENST00000426196 POLR2EP19388 210 aaKnown RBP14.8□□□□□ -0.04
HDAC6-206ENST00000426196 CASP4P49662 377 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 CCR5P51681 352 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 HS1BP3Q53T59 392 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 MBLAC2Q68D91 279 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 ADIPOR2Q86V24 386 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 ARHGAP18Q8N392 663 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.8□□□□□ -0.04
HDAC6-206ENST00000426196 ELMO3Q96BJ8 720 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 CYFIP2Q96F07 1278 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 DEPDC7Q96QD5 511 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 OMDQ99983 421 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms