RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 AXIN1O15169 862 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 TEX33O43247 280 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 CISD3P0C7P0 127 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 ABCB4P21439 1286 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 CCR1P32246 355 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 NOS2P35228 1153 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 SCNN1AP37088 669 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 KIR2DL1P43626 348 aaPredicted RBP11.36□□□□□ -0.59
USP49-204ENST00000423567 NSFP46459 744 aaKnown RBP11.36□□□□□ -0.59
USP49-204ENST00000423567 GABRB2P47870 512 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 PXNP49023 591 aaPredicted RBP11.36□□□□□ -0.59
USP49-204ENST00000423567 RNASE9P60153 205 aaKnown RBP11.36□□□□□ -0.59
USP49-204ENST00000423567 NOMO3P69849 1222 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 DMWDQ09019 674 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 SIM2Q14190 667 aaPredicted RBP11.36□□□□□ -0.59
USP49-204ENST00000423567 CRY1Q16526 586 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 ZC3H12AQ5D1E8 599 aaKnown RBP11.36□□□□□ -0.59
USP49-204ENST00000423567 MPP7Q5T2T1 576 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 FAM102AQ5T9C2 384 aaPredicted RBP11.36□□□□□ -0.59
USP49-204ENST00000423567 EMC10Q5UCC4 262 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 SND1Q7KZF4 910 aaKnown RBP eCLIP11.36□□□□□ -0.59
USP49-204ENST00000423567 ASCL5Q7RTU5 278 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 LUZP1Q86V48 1076 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 SFTPA1Q8IWL2 248 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 CHPFQ8IZ52 775 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 ATP6V0D2Q8N8Y2 350 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 SLC20A1Q8WUM9 679 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 CPA5Q8WXQ8 436 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 SLC39A13Q96H72 371 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 BTN2A3PQ96KV6 586 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 EPC1Q9H2F5 836 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 TMEM51Q9NW97 253 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.36□□□□□ -0.59
USP49-204ENST00000423567 COX16Q9P0S2 106 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 BCCIPQ9P287 314 aaKnown RBP eCLIP11.36□□□□□ -0.59
USP49-204ENST00000423567 NCDNQ9UBB6 729 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 FBXO10Q9UK96 956 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 GMEB2Q9UKD1 530 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 MYO6Q9UM54 1294 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 SMG5Q9UPR3 1016 aaKnown RBP11.36□□□□□ -0.59
USP49-204ENST00000423567 PAXBP1Q9Y5B6 917 aa11.36□□□□□ -0.59
USP49-204ENST00000423567 GOLGA6L7A0A1B0GV03 622 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 A0A1W2PQC6 194 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 PRRT4C9JH25 899 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 GOLGA8SH3BPF8 625 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 M0QYT0 321 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 SGK1O00141 431 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 NPC1O15118 1278 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 TBL1XO60907 577 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 RPP40O75818 363 aaKnown RBP11.35□□□□□ -0.59
USP49-204ENST00000423567 CYP1A1P04798 512 aaPredicted RBP11.35□□□□□ -0.59
USP49-204ENST00000423567 TPM3P06753 285 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 HOXB2P14652 356 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 NTSR1P30989 418 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 MATKP42679 507 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 FMO1Q01740 532 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 NME3Q13232 169 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 STARD3Q14849 445 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 EIF4HQ15056 248 aaKnown RBP11.35□□□□□ -0.59
USP49-204ENST00000423567 USP39Q53GS9 565 aaKnown RBP11.35□□□□□ -0.59
USP49-204ENST00000423567 PIK3R6Q5UE93 754 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 ANO7Q6IWH7 933 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 RFWD3Q6PCD5 774 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 CHSY1Q86X52 802 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 XYLT1Q86Y38 959 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 WFIKKN2Q8TEU8 576 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 GAB3Q8WWW8 586 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 RUBCNQ92622 972 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 CIPCQ9C0C6 399 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 POLR3BQ9NW08 1133 aaPredicted RBP11.35□□□□□ -0.59
USP49-204ENST00000423567 EBF1Q9UH73 591 aa11.35□□□□□ -0.59
USP49-204ENST00000423567 TCRBV21S2A2A0A5A6 115 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 FAM170AA1A519 330 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 KCNU1A8MYU2 1149 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 F5H5T6 163 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 TIMM44O43615 452 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 F9P00740 461 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 IGLV3-25P01717 112 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 CALB1P05937 261 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 HOXD9P28356 352 aaPredicted RBP11.34□□□□□ -0.59
USP49-204ENST00000423567 SLC6A4P31645 630 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 SULT1E1P49888 294 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 FANCCQ00597 558 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 CAMK2BQ13554 666 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 CDH18Q13634 790 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 BYSLQ13895 437 aaKnown RBP11.34□□□□□ -0.59
USP49-204ENST00000423567 FAM133BQ5BKY9 247 aaKnown RBP11.34□□□□□ -0.59
USP49-204ENST00000423567 MS4A13Q5J8X5 152 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 EGFLAMQ63HQ2 1017 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 LAIR1Q6GTX8 287 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 PPP1R2P3Q6NXS1 205 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 MMS22LQ6ZRQ5 1243 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.34□□□□□ -0.59
USP49-204ENST00000423567 C11orf74Q86VG3 221 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 MFN1Q8IWA4 741 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 LGI2Q8N0V4 545 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 AHI1Q8N157 1196 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 PGBD3Q8N328 593 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 SUMF1Q8NBK3 374 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 AGPAT1Q99943 283 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms