RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 PLEKHH3Q7Z736 793 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 RASSF3Q86WH2 238 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 MFSD3Q96ES6 412 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 FNDC3AQ9Y2H6 1198 aaKnown RBP13.75□□□□□ -0.21
MCF2L-213ENST00000421756 KRT38O76015 456 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 B3GAT3O94766 335 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 JCHAINP01591 159 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 OR4Q2P0C623 313 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 DARSP14868 501 aaKnown RBP13.75□□□□□ -0.21
MCF2L-213ENST00000421756 CCR10P46092 362 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 CXCR3P49682 368 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 CLCNKBP51801 687 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 MRPS5P82675 430 aaKnown RBP13.75□□□□□ -0.21
MCF2L-213ENST00000421756 SLC45A4Q5BKX6 768 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 RNF135Q8IUD6 432 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 CDKL3Q8IVW4 592 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-213ENST00000421756 ANKRD52Q8NB46 1076 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 OXCT2Q9BYC2 517 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-213ENST00000421756 ANLNQ9NQW6 1124 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 ARHGEF4Q9NR80 690 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 UBQLN1Q9UMX0 589 aaKnown RBP13.75□□□□□ -0.21
MCF2L-213ENST00000421756 PSME4Q14997 1843 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 LCTP09848 1927 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 TTC24A2A3L6 582 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-213ENST00000421756 EME2A4GXA9 379 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-213ENST00000421756 NEBLO76041 1014 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 BDNFP23560 247 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 USP4Q13107 963 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 THOC5Q13769 683 aaKnown RBP13.75□□□□□ -0.21
MCF2L-213ENST00000421756 PDK2Q15119 407 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 RCN1Q15293 331 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 LGSNQ5TDP6 509 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 RAB3IPQ96QF0 476 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-213ENST00000421756 ABHD16BQ9H3Z7 469 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 PLAC1Q9HBJ0 212 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 SLC24A3Q9HC58 644 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 VTA1Q9NP79 307 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 MTMR10Q9NXD2 777 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 MYADML2A6NDP7 307 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 SORBS2O94875 1100 aaKnown RBP13.74□□□□□ -0.21
MCF2L-213ENST00000421756 GABRB2P47870 512 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 INCA1Q0VD86 236 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 PCSK7Q16549 785 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 TMEM110Q86TL2 294 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 SCN4BQ8IWT1 228 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 WDR60Q8WVS4 1066 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 ZNF778Q96MU6 729 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 CADM1Q9BY67 442 aaKnown RBP13.74□□□□□ -0.21
MCF2L-213ENST00000421756 TMEM30AQ9NV96 361 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 PNPOQ9NVS9 261 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 DNAJC16Q9Y2G8 782 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 DGKIO75912 1065 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 ERCC2P18074 760 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 RASSF2P50749 326 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 ITGA9Q13797 1035 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 FASTKD1Q53R41 847 aaKnown RBP13.74□□□□□ -0.21
MCF2L-213ENST00000421756 TDRPQ86YL5 185 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 RELL1Q8IUW5 271 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 SCAMP5Q8TAC9 235 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 EBNA1BP2Q99848 306 aaKnown RBP13.74□□□□□ -0.21
MCF2L-213ENST00000421756 SLC4A5Q9BY07 1137 aa13.74□□□□□ -0.21
MCF2L-213ENST00000421756 MSI1O43347 362 aaKnown RBP13.73□□□□□ -0.21
MCF2L-213ENST00000421756 SLC4A1P02730 911 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 PTPN1P18031 435 aaKnown RBP13.73□□□□□ -0.21
MCF2L-213ENST00000421756 TPI1P60174 286 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 ZNF460Q14592 562 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 MUM1Q2TAK8 710 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 KIAA0319Q5VV43 1072 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 TREML1Q86YW5 311 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 DCLK2Q8N568 766 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 SPATA22Q8NHS9 363 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 MZB1Q8WU39 189 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 SIGLEC10Q96LC7 697 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 ADAMTS10Q9H324 1103 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 C15orf41Q9Y2V0 281 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 PRR5-ARHGAP8B1AHC4 643 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 CHADO15335 359 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 GPR32O75388 356 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 PDE5AO76074 875 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 PGM1P36871 562 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 HUNKP57058 714 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 ARHGAP8P85298 464 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 SLC25A3Q00325 362 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 STX3Q13277 289 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 TAF1CQ15572 869 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-213ENST00000421756 OTOP3Q7RTS5 596 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 CRLF3Q8IUI8 442 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 GSDMBQ8TAX9 411 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 OXNAD1Q96HP4 312 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-213ENST00000421756 MARK4Q96L34 752 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 SENP8Q96LD8 212 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 AP5M1Q9H0R1 490 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 MIOSQ9NXC5 875 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 CCL22O00626 93 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 PHGDHO43175 533 aaKnown RBP13.73□□□□□ -0.21
MCF2L-213ENST00000421756 RFPL1O75677 317 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 MT-CO1P00395 513 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 MCCD1P59942 119 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-213ENST00000421756 ENPEPQ07075 957 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 ITKQ08881 620 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms