RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 GTF2BQ00403 316 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 WASHC5Q12768 1159 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 ATP1A4Q13733 1029 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 CYTH1Q15438 398 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 METTL21CQ5VZV1 264 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 KRT39Q6A163 491 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 NIPAL1Q6NVV3 410 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 MFSD7Q6UXD7 560 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 TRIM72Q6ZMU5 477 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 ZCCHC23Q6ZST2 131 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 FRMD7Q6ZUT3 714 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 KCTD1Q719H9 257 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 CRLF3Q8IUI8 442 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 TMEM126BQ8IUX1 230 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 PPIL6Q8IXY8 311 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 TAB3Q8N5C8 712 aaPredicted RBP6.28□□□□□ -1.4
CHD2-202ENST00000420239 TBC1D15Q8TC07 691 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 CHPT1Q8WUD6 406 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 CPT1BQ92523 772 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 BORCS5Q969J3 196 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 ERLEC1Q96DZ1 483 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 KLRG1Q96E93 195 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 PLEKHA8Q96JA3 519 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 CCDC17Q96LX7 622 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 NT5C1BQ96P26 610 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 SLITRK1Q96PX8 696 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 MMP19Q99542 508 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 PKP2Q99959 881 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 DCUN1D5Q9BTE7 237 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 AMNQ9BXJ7 453 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 EIF2AQ9BY44 585 aaKnown RBP6.28□□□□□ -1.4
CHD2-202ENST00000420239 TPK1Q9H3S4 243 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 PCIF1Q9H4Z3 704 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 STN1Q9H668 368 aaKnown RBP6.28□□□□□ -1.4
CHD2-202ENST00000420239 C10orf88Q9H8K7 445 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 MAN1C1Q9NR34 630 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 TUBA8Q9NY65 449 aaPredicted RBP6.28□□□□□ -1.4
CHD2-202ENST00000420239 HSPBP1Q9NZL4 362 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 IGSF9Q9P2J2 1179 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 GIT1Q9Y2X7 761 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 SIPA1L1O43166 1804 aa6.28□□□□□ -1.4
CHD2-202ENST00000420239 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 MEN1O00255 615 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 COPEO14579 308 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 SIN3BO75182 1162 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 LYPLA1O75608 230 aaPredicted RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 ATE1O95260 518 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 C1QAP02745 245 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 CD1EP15812 388 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 ZNF12P17014 697 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 PTPN1P18031 435 aaKnown RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 CD247P20963 164 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 CDH3P22223 829 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 EPHA3P29320 983 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 ECE1P42892 770 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 EIF2B2P49770 351 aaKnown RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 KPNA1P52294 538 aaPredicted RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 CDH15P55291 814 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 RACK1P63244 317 aaKnown RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 MRPS22P82650 360 aaKnown RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 MMRN1Q13201 1228 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 BBS9Q3SYG4 887 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 SMUG1Q53HV7 270 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 RARS2Q5T160 578 aaKnown RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 C6orf183Q5T699 404 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 DEPDC1Q5TB30 811 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 LIN9Q5TKA1 542 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 ATG16L1Q676U5 607 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 PLA2G4FQ68DD2 849 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 SNRNP48Q6IEG0 339 aaKnown RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 TPTE2Q6XPS3 522 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 SLC30A10Q6XR72 485 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 ATG14Q6ZNE5 492 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 RSPH3Q86UC2 560 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 GPR180Q86V85 440 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 PHF13Q86YI8 300 aaPredicted RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 GALNT4Q8N4A0 578 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 RPGRQ92834 1020 aaKnown RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 ISOC1Q96CN7 298 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 MFSD14AQ96MC6 490 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 CBWD1Q9BRT8 395 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 HAUS8Q9BT25 410 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 TCHPQ9BT92 498 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 TMEM121Q9BTD3 319 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 WDR18Q9BV38 432 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 GCOM2Q9BZD3 368 aaPredicted RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 GBA3Q9H227 469 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 COPS7BQ9H9Q2 264 aaPredicted RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 MRPL47Q9HD33 250 aaKnown RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 CD209Q9NNX6 404 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 NYAP2Q9P242 653 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 CDH7Q9ULB5 785 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 EXOC7Q9UPT5 735 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 PLLPQ9Y342 182 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 AFG3L2Q9Y4W6 797 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 NOX1Q9Y5S8 564 aa6.27□□□□□ -1.4
CHD2-202ENST00000420239 GPC6Q9Y625 555 aaPredicted RBP6.27□□□□□ -1.4
CHD2-202ENST00000420239 STRCQ7RTU9 1775 aa6.27□□□□□ -1.41
CHD2-202ENST00000420239 SCN4AP35499 1836 aa6.27□□□□□ -1.41
CHD2-202ENST00000420239 hCG_1818297A0A087WSY0 165 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms