RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 HMGXB4Q9UGU5 601 aa14.26□□□□□ -0.13
CHEK2-210ENST00000416671 CDH22Q9UJ99 828 aa14.26□□□□□ -0.13
CHEK2-210ENST00000416671 GAS2O43903 313 aaKnown RBP14.25□□□□□ -0.13
CHEK2-210ENST00000416671 SORBS2O94875 1100 aaKnown RBP14.25□□□□□ -0.13
CHEK2-210ENST00000416671 TNNC2P02585 160 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 LGALS2P05162 132 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 ATP6V1B1P15313 513 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 CDKN2BP42772 138 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 ALDH1A3P47895 512 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 ZNF157P51786 506 aaPredicted RBP14.25□□□□□ -0.13
CHEK2-210ENST00000416671 YWHAGP61981 247 aaKnown RBP eCLIP14.25□□□□□ -0.13
CHEK2-210ENST00000416671 TMEM62Q0P6H9 643 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 CBX3Q13185 183 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 MYLK3Q32MK0 819 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 LRRC38Q5VT99 294 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 DCUN1D2Q6PH85 259 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 IGDCC3Q8IVU1 814 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 POU5F2Q8N7G0 328 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 ZBTB8BQ8NAP8 495 aaPredicted RBP14.25□□□□□ -0.13
CHEK2-210ENST00000416671 AFG1LQ8WV93 481 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 RPF1Q9H9Y2 349 aaKnown RBP14.25□□□□□ -0.13
CHEK2-210ENST00000416671 CPA4Q9UI42 421 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 SIX4Q9UIU6 781 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 POMPQ9Y244 141 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 SH3GLB1Q9Y371 365 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 SF3B1O75533 1304 aaKnown RBP eCLIP14.25□□□□□ -0.13
CHEK2-210ENST00000416671 LACTBL1A8MY62 500 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 KBTBD13C9JR72 458 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 KRT37O76014 449 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 KLHL2O95198 593 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 PROCP04070 461 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 ITGB3P05106 788 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 AP3M2P53677 418 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 OGFRL1Q5TC84 451 aaPredicted RBP14.25□□□□□ -0.13
CHEK2-210ENST00000416671 JADE1Q6IE81 842 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 TAPT1Q6NXT6 567 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 DENND1BQ6P3S1 775 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 DPH6Q7L8W6 267 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 ANKRD23Q86SG2 305 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 SLC26A11Q86WA9 606 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 C1orf127Q8N9H9 656 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 TTC13Q8NBP0 860 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 RAB3IL1Q8TBN0 382 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 ACTRT2Q8TDY3 377 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 C20orf27Q9GZN8 174 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 UBAP1Q9NZ09 502 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 SAE1Q9UBE0 346 aaPredicted RBP14.25□□□□□ -0.13
CHEK2-210ENST00000416671 CYTH4Q9UIA0 394 aa14.25□□□□□ -0.13
CHEK2-210ENST00000416671 ANK1P16157 1881 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 TMEM191CA6NGB0 347 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 CYB561D2O14569 222 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 SNNO75324 88 aaPredicted RBP14.24□□□□□ -0.13
CHEK2-210ENST00000416671 TNFAIP8O95379 198 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 DYNLT1P63172 113 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 OTUD4Q01804 1114 aaKnown RBP14.24□□□□□ -0.13
CHEK2-210ENST00000416671 GRM1Q13255 1194 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 KRT81Q14533 505 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 DNAJC24Q6P3W2 148 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 ISLR2Q6UXK2 745 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 ACTL9Q8TC94 416 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 DCUN1D1Q96GG9 259 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 TWNKQ96RR1 684 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 SLC13A1Q9BZW2 595 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 SDCBP2Q9H190 292 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 CYP4F11Q9HBI6 524 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 DDX56Q9NY93 547 aaKnown RBP14.24□□□□□ -0.13
CHEK2-210ENST00000416671 THEGQ9P2T0 379 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 ZNF232Q9UNY5 417 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 MAGEB3O15480 346 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 DNAJA2O60884 412 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 TRMUO75648 421 aaKnown RBP14.24□□□□□ -0.13
CHEK2-210ENST00000416671 FAM155BO75949 473 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 SNRPAP09012 282 aaKnown RBP14.24□□□□□ -0.13
CHEK2-210ENST00000416671 STAG3L1P0CL83 205 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 PCSK6P29122 969 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 CLCN2P51788 898 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 BASP1P80723 227 aaKnown RBP14.24□□□□□ -0.13
CHEK2-210ENST00000416671 MRPS5P82675 430 aaKnown RBP14.24□□□□□ -0.13
CHEK2-210ENST00000416671 COG7P83436 770 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 BTKQ06187 659 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 STX3Q13277 289 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 MTA1Q13330 715 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 CNGA3Q16281 694 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 MAMDC4Q6UXC1 1216 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 DENND5BQ6ZUT9 1274 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 WDR75Q8IWA0 830 aaKnown RBP14.24□□□□□ -0.13
CHEK2-210ENST00000416671 NUP93Q8N1F7 819 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 CCDC33Q8N5R6 958 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 TMEM35BQ8NCS4 154 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 SENP6Q9GZR1 1112 aaPredicted RBP14.24□□□□□ -0.13
CHEK2-210ENST00000416671 ITGA11Q9UKX5 1188 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 GINS2Q9Y248 185 aa14.24□□□□□ -0.13
CHEK2-210ENST00000416671 H3BNX3 289 aa14.23□□□□□ -0.13
CHEK2-210ENST00000416671 B4GALT4O60513 344 aa14.23□□□□□ -0.13
CHEK2-210ENST00000416671 SPAG6O75602 509 aa14.23□□□□□ -0.13
CHEK2-210ENST00000416671 SMTNL2Q2TAL5 461 aa14.23□□□□□ -0.13
CHEK2-210ENST00000416671 PTPN20Q4JDL3 420 aa14.23□□□□□ -0.13
CHEK2-210ENST00000416671 TCHHL1Q5QJ38 904 aaPredicted RBP14.23□□□□□ -0.13
CHEK2-210ENST00000416671 KBTBD6Q86V97 674 aa14.23□□□□□ -0.13
CHEK2-210ENST00000416671 RASAL3Q86YV0 1011 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms