RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ZNF354BQ96LW1 612 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 GPRC5CQ9NQ84 441 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 PRODHO43272 600 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 KHDRBS3O75525 346 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 COMTP21964 271 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 LSP1P33241 339 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 TKTL1P51854 596 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 PPIL2Q13356 520 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 CSHL1Q14406 222 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 ZNHIT3Q15649 155 aaPredicted RBP11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 SLC39A12Q504Y0 691 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 ZNF484Q5JVG2 852 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 CDC73Q6P1J9 531 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 CXorf40BQ96DE9 158 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 CCDC126Q96EE4 140 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 POP1Q99575 1024 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 KCNN2Q9H2S1 579 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 MROH8Q9H579 483 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 EPB41L4AQ9HCS5 686 aaPredicted RBP11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 AGPAT5Q9NUQ2 364 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 FZD1Q9UP38 647 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 PCDHB2Q9Y5E7 798 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 SPATA31A6Q5VVP1 1343 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 KPNA6O60684 536 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 HHIPL2Q6UWX4 724 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 GET4Q7L5D6 327 aaPredicted RBP11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 TLK2Q86UE8 772 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 ATP6V1C2Q8NEY4 427 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 DPF2Q92785 391 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 IL17RAQ96F46 866 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 CLCC1Q96S66 551 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 CEP41Q9BYV8 373 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 MARK1Q9P0L2 795 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 SHOC2Q9UQ13 582 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 PNMA6AP0CW24 399 aaPredicted RBP11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 TARSP26639 723 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 AKT2P31751 481 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 RAPSNQ13702 412 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 FAM172AQ8WUF8 416 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 CELF6Q96J87 481 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 FERD3LQ96RJ6 166 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 NEXMIFQ5QGS0 1516 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 TMEM114B3SHH9 223 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 IDH3BO43837 385 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 NTSR2O95665 410 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 GARTP22102 1010 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 PTSQ03393 145 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 BCL2L1Q07817 233 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 LGI2Q8N0V4 545 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 FNDC5Q8NAU1 212 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 E2F7Q96AV8 911 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 CELF4Q9BZC1 486 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 VPS33BQ9H267 617 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 DUSP12Q9UNI6 340 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 TCEA3O75764 348 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 SNUPNO95149 360 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 MUTP22033 750 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 KCNJ1P48048 391 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 NAT16Q8N8M0 369 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 OR10H1Q9Y4A9 318 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 CCDC154A6NI56 674 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 RBAK-RBAKDNI3L0D1 243 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 TRIM66O15016 1216 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 RAD51BO15315 384 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 GAS2O43903 313 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 ERO1BQ86YB8 467 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 PIH1D1Q9NWS0 290 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 ARL2BPQ9Y2Y0 163 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 MTO1Q9Y2Z2 717 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 C1orf167Q5SNV9 1468 aa11.48□□□□□ -0.57
PRPF40A-202ENST00000410080 SAC3D1A6NKF1 404 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 ENTPD3O75355 529 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 MPOP05164 745 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 RBP3P10745 1247 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 UCHL3P15374 230 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 CCR1P32246 355 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 NT5C2P49902 561 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 RCAN1P53805 252 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 PMF1Q6P1K2 205 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 ZNF671Q8TAW3 534 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 TRIM9Q9C026 710 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 PCDHB5Q9Y5E4 795 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 ANKDD1BA6NHY2 528 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 FAM20BO75063 409 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 ECDO95905 644 aaPredicted RBP11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 USP17L7P0C7H9 530 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 PDHA2P29803 388 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 IL5RAQ01344 420 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 EXOSC10Q01780 885 aaKnown RBP11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 PDIA5Q14554 519 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 GRIK4Q16099 956 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 MAP1SQ66K74 1059 aaPredicted RBP11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 FAM220AQ7Z4H9 259 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 GULP1Q9UBP9 304 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 PIK3C2BO00750 1634 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 CNOT3O75175 753 aaKnown RBP11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 POMZP3Q6PJE2 187 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 HPS6Q86YV9 775 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 LRRC1Q9BTT6 524 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 COMMD8Q9NX08 183 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms