RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CACNA1FO60840 1977 aa10.22□□□□□ -0.77
PTPRM-203ENST00000400060 CASZ1Q86V15 1759 aa10.22□□□□□ -0.77
PTPRM-203ENST00000400060 AP1G1O43747 822 aa10.22□□□□□ -0.77
PTPRM-203ENST00000400060 WBP4O75554 376 aaKnown RBP10.22□□□□□ -0.77
PTPRM-203ENST00000400060 MTA2O94776 668 aa10.22□□□□□ -0.77
PTPRM-203ENST00000400060 ATF4P18848 351 aaPredicted RBP10.22□□□□□ -0.77
PTPRM-203ENST00000400060 AOC1P19801 751 aa10.22□□□□□ -0.77
PTPRM-203ENST00000400060 NMT1P30419 496 aaKnown RBP10.22□□□□□ -0.77
PTPRM-203ENST00000400060 TUFMP49411 452 aaKnown RBP10.22□□□□□ -0.77
PTPRM-203ENST00000400060 SQLEQ14534 574 aa10.22□□□□□ -0.77
PTPRM-203ENST00000400060 CLEC16AQ2KHT3 1053 aa10.22□□□□□ -0.77
PTPRM-203ENST00000400060 ERFEQ4G0M1 354 aa10.22□□□□□ -0.77
PTPRM-203ENST00000400060 RDH11Q8TC12 318 aa10.22□□□□□ -0.77
PTPRM-203ENST00000400060 HELQQ8TDG4 1101 aa10.22□□□□□ -0.77
PTPRM-203ENST00000400060 AIFM2Q9BRQ8 373 aa10.22□□□□□ -0.77
PTPRM-203ENST00000400060 TMEM8AQ9HCN3 771 aa10.22□□□□□ -0.77
PTPRM-203ENST00000400060 COMMD8Q9NX08 183 aa10.22□□□□□ -0.77
PTPRM-203ENST00000400060 MRPL11Q9Y3B7 192 aaKnown RBP10.22□□□□□ -0.77
PTPRM-203ENST00000400060 ROBO3Q96MS0 1386 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 FRMPD2Q68DX3 1309 aaPredicted RBP10.21□□□□□ -0.77
PTPRM-203ENST00000400060 TNFRSF10AO00220 468 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 PSMB9P28065 219 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 MYL6P60660 151 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 ATP6V0D1P61421 351 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 ECT2LQ008S8 904 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 UBAP2LQ14157 1087 aaKnown RBP10.21□□□□□ -0.77
PTPRM-203ENST00000400060 SLC1A5Q15758 541 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 SFT2D3Q587I9 215 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 CCDC81Q6ZN84 652 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 ANKS1BQ7Z6G8 1248 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 LRRC47Q8N1G4 583 aaKnown RBP10.21□□□□□ -0.77
PTPRM-203ENST00000400060 CNTD1Q8N815 330 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 PIK3C3Q8NEB9 887 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 C7orf43Q8WVR3 580 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 ADPGKQ9BRR6 497 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 SHCBP1LQ9BZQ2 653 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 CPNE5Q9HCH3 593 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 UBA2Q9UBT2 640 aaPredicted RBP10.21□□□□□ -0.77
PTPRM-203ENST00000400060 PCDHGA3Q9Y5H0 932 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 PCDHA1Q9Y5I3 950 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 CCRL2O00421 344 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 DCXO43602 365 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 PRELPP51888 382 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 TTLL12Q14166 644 aaPredicted RBP10.21□□□□□ -0.77
PTPRM-203ENST00000400060 LRRC38Q5VT99 294 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 MOXD1Q6UVY6 613 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 UGT2B28Q9BY64 529 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 TXLNGYQ9BZA5 131 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 TPK1Q9H3S4 243 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 ZFYVE28Q9HCC9 887 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 KMT5AQ9NQR1 393 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 FAM217BQ9NTX9 383 aaPredicted RBP10.21□□□□□ -0.77
PTPRM-203ENST00000400060 SEPT9Q9UHD8 586 aaPredicted RBP10.21□□□□□ -0.77
PTPRM-203ENST00000400060 PPM1HQ9ULR3 514 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 MAPRE3Q9UPY8 281 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 PEX16Q9Y5Y5 336 aa10.21□□□□□ -0.77
PTPRM-203ENST00000400060 ATRNO75882 1429 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 TNS3Q68CZ2 1445 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 SPEF2Q9C093 1822 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 HNRNPDLO14979 420 aaKnown RBP10.21□□□□□ -0.78
PTPRM-203ENST00000400060 EPHB6O15197 1021 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 ITGAVP06756 1048 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 FAAP100Q0VG06 881 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 PTP4A2Q12974 167 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 MSLNQ13421 630 aaPredicted RBP10.21□□□□□ -0.78
PTPRM-203ENST00000400060 GRM2Q14416 872 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 RBM48Q5RL73 367 aaKnown RBP10.21□□□□□ -0.78
PTPRM-203ENST00000400060 OGFRL1Q5TC84 451 aaPredicted RBP10.21□□□□□ -0.78
PTPRM-203ENST00000400060 BRINP3Q76B58 766 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 STRA8Q7Z7C7 330 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 SYTL1Q8IYJ3 562 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 LILRB4Q8NHJ6 448 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 USP13Q92995 863 aaPredicted RBP10.21□□□□□ -0.78
PTPRM-203ENST00000400060 ZHX1-C8orf76Q96EF9 292 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 REEP2Q9BRK0 252 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 ANAPC2Q9UJX6 822 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 MKLN1Q9UL63 735 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 CLTCQ00610 1675 aaKnown RBP10.21□□□□□ -0.78
PTPRM-203ENST00000400060 SF3B1O75533 1304 aaKnown RBP eCLIP10.21□□□□□ -0.78
PTPRM-203ENST00000400060 NPHP3-ACAD11A0A0J9YXS1 232 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 BBIP1A8MTZ0 92 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 FADS2P1A8MWK0 482 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 PI4K2BG5E9Z4 385 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 H0YIN7 160 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 TRIM13O60858 407 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 PSME3P61289 254 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 YWHAHQ04917 246 aaPredicted RBP10.21□□□□□ -0.78
PTPRM-203ENST00000400060 TCP10Q12799 353 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 PRKD1Q15139 912 aaPredicted RBP10.21□□□□□ -0.78
PTPRM-203ENST00000400060 GRTP1Q5TC63 336 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 DCDC5Q6ZRR9 648 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 MLPHQ9BV36 600 aaPredicted RBP10.21□□□□□ -0.78
PTPRM-203ENST00000400060 TASP1Q9H6P5 420 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 PKD2L1Q9P0L9 805 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 HESX1Q9UBX0 185 aa10.21□□□□□ -0.78
PTPRM-203ENST00000400060 PRR23D1E9PI22 279 aaPredicted RBP10.2□□□□□ -0.78
PTPRM-203ENST00000400060 K7EPI3 171 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 MEIS1O00470 390 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 ABCB1P08183 1280 aaPredicted RBP10.2□□□□□ -0.78
PTPRM-203ENST00000400060 PRR23D2P0DMB1 279 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms