RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 DDX3XO00571 662 aaKnown RBP eCLIP14.08□□□□□ -0.161e-55■■■■□ 24.4
VAPA-202ENST00000400000 DAB2IPQ5VWQ8 1189 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 SLC2A14Q8TDB8 520 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 PCDHB5Q9Y5E4 795 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 GLRA3O75311 464 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 LHX1P48742 406 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 SFSWAPQ12872 951 aaKnown RBP14.08□□□□□ -0.16
VAPA-202ENST00000400000 NPNTQ6UXI9 565 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 ITIH5Q86UX2 942 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 TMEM159Q96B96 161 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 ISCUQ9H1K1 167 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 VPS33BQ9H267 617 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 MID1IP1Q9NPA3 183 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 PEX1O43933 1283 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 DSG1Q02413 1049 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 INSCQ1MX18 579 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 BOLA3Q53S33 107 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 AADACL2Q6P093 401 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 LRIG3Q6UXM1 1119 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 BRSK2Q8IWQ3 736 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 ZBTB10Q96DT7 871 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 ADI1Q9BV57 179 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 SLC4A5Q9BY07 1137 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 SLC40A1Q9NP59 571 aa14.08□□□□□ -0.16
VAPA-202ENST00000400000 LBPP18428 481 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 PGM5Q15124 567 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 MARC1Q5VT66 337 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 ZNF677Q86XU0 584 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 NMD3Q96D46 503 aaKnown RBP14.07□□□□□ -0.16
VAPA-202ENST00000400000 UBE2OQ9C0C9 1292 aaKnown RBP14.07□□□□□ -0.16
VAPA-202ENST00000400000 RAD21L1Q9H4I0 556 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 PSTPIP1O43586 416 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 RAMP2O60895 175 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 AMD1P17707 334 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 NFKB1P19838 968 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 CCNIQ14094 377 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 ZNF621Q6ZSS3 439 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 LRRC40Q9H9A6 602 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 CCT8L1PA6NM43 557 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 BTN3A1O00481 513 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 PFKPQ01813 784 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 EDRF1Q3B7T1 1238 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 SGSM3Q96HU1 749 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 TM6SF2Q9BZW4 377 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 RGS18Q9NS28 235 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 NCKAP1Q9Y2A7 1128 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 PCDHAC2Q9Y5I4 1007 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 CAPN6Q9Y6Q1 641 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 GAKO14976 1311 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 ITGAXP20702 1163 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 MPP3Q13368 585 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 POU5F2Q8N7G0 328 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 PPP1R2P1Q96PQ5 205 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 DUSP12Q9UNI6 340 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 PREX2Q70Z35 1606 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 OR10G6Q8NH81 332 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 ELMO1Q92556 727 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 PMM1Q92871 262 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 DNAJC1Q96KC8 554 aaKnown RBP14.07□□□□□ -0.16
VAPA-202ENST00000400000 TKTL2Q9H0I9 626 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 C1orf167Q5SNV9 1468 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 OR6A2O95222 327 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 POLR2EP19388 210 aaKnown RBP14.07□□□□□ -0.16
VAPA-202ENST00000400000 ARF5P84085 180 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 BST2Q10589 180 aaKnown RBP14.07□□□□□ -0.16
VAPA-202ENST00000400000 RABL6Q3YEC7 729 aaPredicted RBP14.07□□□□□ -0.16
VAPA-202ENST00000400000 PLA2G12BQ9BX93 195 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 DPY30Q9C005 99 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 CARD9Q9H257 536 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 MBD5Q9P267 1494 aa14.07□□□□□ -0.16
VAPA-202ENST00000400000 MTSS1O43312 755 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 HOXA2O43364 376 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 DEFA1P59665 94 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 DEFA3P59666 94 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 ACVR2BQ13705 512 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 NCF4Q15080 339 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 SPATA6LQ8N4H0 392 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 RIBC2Q9H4K1 309 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 WDR41Q9HAD4 459 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 AASDHPPTQ9NRN7 309 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 PIAS1O75925 651 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 VAPBO95292 243 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 SOX6P35712 828 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 PTPN11Q06124 597 aaPredicted RBP14.06□□□□□ -0.16
VAPA-202ENST00000400000 LPIN1Q14693 890 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 FBXL19Q6PCT2 694 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 KLHL24Q6TFL4 600 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 C6orf62Q9GZU0 229 aaPredicted RBP14.06□□□□□ -0.16
VAPA-202ENST00000400000 POMKQ9H5K3 350 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 MSRAQ9UJ68 235 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 PIRTP0C851 137 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 SLURP2P0DP57 97 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 ETS1P14921 441 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 NDUFV1P49821 464 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 DENND1CQ8IV53 801 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 ZFPM1Q8IX07 1006 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 RHOBTB2Q9BYZ6 727 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.06□□□□□ -0.16
VAPA-202ENST00000400000 CIDEBQ9UHD4 219 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 FAM153AQ9UHL3 310 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms