RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 GRIK3Q13003 919 aa13.73□□□□□ -0.21
LDLRAD4-203ENST00000399848 PKN1Q16512 942 aa13.73□□□□□ -0.21
LDLRAD4-203ENST00000399848 HHIPL2Q6UWX4 724 aa13.73□□□□□ -0.21
LDLRAD4-203ENST00000399848 INO80Q9ULG1 1556 aaPredicted RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 OGTO15294 1046 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 RPN2P04844 631 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 ZNF24P17028 368 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 DMPKQ09013 629 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 CCNG2Q16589 344 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 SAMD4BQ5PRF9 694 aaKnown RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 EXOC3L1Q86VI1 746 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 QKIQ96PU8 341 aaKnown RBP eCLIP13.72□□□□□ -0.212e-7■■■■□ 19.4
LDLRAD4-203ENST00000399848 S100A13Q99584 98 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 TMEM121Q9BTD3 319 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 PCDH9Q9HC56 1237 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 MKL2Q9ULH7 1088 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 C15orf38-AP3S2A0A0A6YYH1 394 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 C17orf102A2RUQ5 167 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 LHX1P48742 406 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 ARPINQ7Z6K5 226 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 ADGRF2Q8IZF7 708 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 BTBD10Q9BSF8 475 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 C1QTNF7Q9BXJ2 289 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 GALNT8Q9NY28 637 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 RABGEF1Q9UJ41 708 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 UBOX5O94941 541 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 SNUPNO95149 360 aaKnown RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 UQCRBP14927 111 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 TNS3Q68CZ2 1445 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 FNDC5Q8NAU1 212 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 FAM172AQ8WUF8 416 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 CENPIQ92674 756 aaPredicted RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 GSTK1Q9Y2Q3 226 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 S100A9P06702 114 aaKnown RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 MSH3P20585 1137 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 RPL10AP62906 217 aaKnown RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 SLC34A1Q06495 639 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 MGAT5Q09328 741 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 ZSWIM7Q19AV6 140 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 GDPD5Q8WTR4 605 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 ACSF2Q96CM8 615 aaPredicted RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 TMEM51Q9NW97 253 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 ADPRHL2Q9NX46 363 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 SIK3Q9Y2K2 1263 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 A0A087X0T9 212 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 HOXC6P09630 235 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 FAM228BP0C875 321 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 HALP42357 657 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 RENBPP51606 427 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 FASTKQ14296 549 aaKnown RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 AMHR2Q16671 573 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 GNASQ5JWF2 1037 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 NECAB2Q7Z6G3 386 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 CBWD2Q8IUF1 395 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 SPPL2AQ8TCT8 520 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 ATP8B4Q8TF62 1192 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 ZCCHC2Q9C0B9 1178 aaKnown RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 ADARB2Q9NS39 739 aaKnown RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 AP4E1Q9UPM8 1137 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 PCDHGA4Q9Y5G9 962 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 BCLAF3A2AJT9 711 aaKnown RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 FOXN3O00409 490 aaPredicted RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 C2CD2LO14523 706 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 ATG4AQ8WYN0 398 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 MRPS31Q92665 395 aaKnown RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 DPY30Q9C005 99 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 GBA2Q9HCG7 927 aaPredicted RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 SAE1Q9UBE0 346 aaPredicted RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 PRKAG3Q9UGI9 489 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 A0A087WXM4 84 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 PLEKP08567 350 aaPredicted RBP13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 VAV1P15498 845 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 RIPOR1Q6ZS17 1223 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 MTSS1LQ765P7 747 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 CPNE1Q99829 537 aa13.72□□□□□ -0.21
LDLRAD4-203ENST00000399848 KPNA6O60684 536 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 EPC2Q52LR7 807 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 OTUD3Q5T2D3 398 aaPredicted RBP13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 SEPHS2Q99611 448 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 PAIP1Q9H074 479 aaKnown RBP13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 PIF1Q9H611 641 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 KCNQ2O43526 872 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 SERPINE1P05121 402 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 ALOX12P18054 663 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 CCNA2P20248 432 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 MYBPC2Q14324 1141 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 ZSCAN18Q8TBC5 510 aaPredicted RBP13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 ERI2A8K979 691 aaKnown RBP13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 TSPAN19P0C672 248 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 NFIAQ12857 509 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 TCHHL1Q5QJ38 904 aaPredicted RBP13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 PROX1Q92786 737 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 FUT8Q9BYC5 575 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 POLR1DQ9Y2S0 133 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 TRIM17Q9Y577 477 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 CCDC189A1A4V9 331 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 MSCO60682 206 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 GHRP10912 638 aa13.71□□□□□ -0.21
LDLRAD4-203ENST00000399848 PEX6Q13608 980 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms