RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 TAS2R40P59535 323 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 PDPK2PQ6A1A2 396 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 CARNMT1Q8N4J0 409 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 SNX31Q8N9S9 440 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 YIPF3Q9GZM5 350 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 LHX5Q9H2C1 402 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 HMX1Q9NP08 348 aaPredicted RBP14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 ABCC13Q9NSE7 274 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 WWOXQ9NZC7 414 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 KIF17Q9P2E2 1029 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 ACTL7BQ9Y614 415 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 USP2O75604 605 aaPredicted RBP14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 ABHD2P08910 425 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 TCN1P20061 433 aaPredicted RBP14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 SCNN1BP51168 640 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 AUHQ13825 339 aaKnown RBP14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 FLOT2Q14254 428 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 CSHL1Q14406 222 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 RETSATQ6NUM9 610 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 LAYNQ6UX15 382 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 HERC6Q8IVU3 1022 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 HS6ST3Q8IZP7 471 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 CENPTQ96BT3 561 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 C12orf42Q96LP6 360 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 TSPAN18Q96SJ8 248 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 ZNF670Q9BS34 389 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 CLPBQ9H078 707 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 EIF4E1BA6NMX2 242 aaKnown RBP14.58□□□□□ -0.07
PCDHGA11-201ENST00000398587 ARL2P36404 184 aa14.58□□□□□ -0.07
PCDHGA11-201ENST00000398587 CCDC153Q494R4 210 aa14.58□□□□□ -0.07
PCDHGA11-201ENST00000398587 YME1L1Q96TA2 773 aa14.58□□□□□ -0.07
PCDHGA11-201ENST00000398587 CPNE1Q99829 537 aa14.58□□□□□ -0.07
PCDHGA11-201ENST00000398587 CCDC134Q9H6E4 229 aa14.58□□□□□ -0.07
PCDHGA11-201ENST00000398587 CYP4F12Q9HCS2 524 aa14.58□□□□□ -0.07
PCDHGA11-201ENST00000398587 SRRM3A6NNA2 597 aaPredicted RBP14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 PRPF4O43172 522 aaKnown RBP eCLIP14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 TSHRP16473 764 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 OR1E1P30953 314 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 SLC39A12Q504Y0 691 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 APBA2Q99767 749 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 NRDE2Q9H7Z3 1164 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 DERAQ9Y315 318 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 MAFBQ9Y5Q3 323 aaPredicted RBP14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 ADAMTS3O15072 1205 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 TRIM13O60858 407 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 C4BPAP04003 597 aaKnown RBP14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 HSPA1AP0DMV8 641 aaKnown RBP14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 HSPA1BP0DMV9 641 aaKnown RBP14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 ETS1P14921 441 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 PTPN4P29074 926 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 VHLP40337 213 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 TUFMP49411 452 aaKnown RBP14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 TSHZ1Q6ZSZ6 1077 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 TBC1D19Q8N5T2 526 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 CCDC90BQ9GZT6 254 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 OR12D3Q9UGF7 316 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 ZNF541Q9H0D2 1346 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 A0A096LPK6 155 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 PFDN1O60925 122 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 DDHD2O94830 711 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 ITGA9Q13797 1035 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 FAM110CQ1W6H9 321 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 PLEKHA7Q6IQ23 1121 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 PTAR1Q7Z6K3 402 aaPredicted RBP14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 ITIH5Q86UX2 942 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 ZNF333Q96JL9 665 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 THAP1Q9NVV9 213 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 TAGLN3Q9UI15 199 aa14.58□□□□□ -0.08
PCDHGA11-201ENST00000398587 SNED1Q8TER0 1413 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 ALADP13716 330 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 INPP1P49441 399 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 JAM2P57087 298 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 SGO1Q5FBB7 561 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 DEFB128Q7Z7B8 93 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 RNPEPQ9H4A4 650 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 VAPBO95292 243 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 PGK1P00558 417 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 FECHP22830 423 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 RPL9P32969 192 aaKnown RBP14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 PRKAA2P54646 552 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 SLC22A9Q8IVM8 553 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 CXorf38Q8TB03 319 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 ZNF75CPQ92670 426 aaPredicted RBP14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 KAT2BQ92831 832 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 UROC1Q96N76 676 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 PIH1D1Q9NWS0 290 aaKnown RBP14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 STX18Q9P2W9 335 aaKnown RBP14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 SOX13Q9UN79 622 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 KIF13AQ9H1H9 1805 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 MSCO60682 206 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 SHBGP04278 402 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 ERBB2P04626 1255 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 TPBGLP0DKB5 382 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 ATXN3P54252 364 aaPredicted RBP14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 PRKAA1Q13131 559 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 PTK2BQ14289 1009 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 RFWD2Q8NHY2 731 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 NTPCRQ9BSD7 190 aaKnown RBP14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 EMILIN2Q9BXX0 1053 aa14.57□□□□□ -0.08
PCDHGA11-201ENST00000398587 PTCH2Q9Y6C5 1203 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms