RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 TARS2Q9BW92 718 aaKnown RBP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 TTKP33981 857 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 SRP54P61011 504 aaKnown RBP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 CCNIQ14094 377 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 SPANXN3Q5MJ09 141 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 MTSS1LQ765P7 747 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 STARD8Q92502 1023 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 MLPHQ9BV36 600 aaPredicted RBP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 PCDH9Q9HC56 1237 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 POLR1DQ9Y2S0 133 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 CNTNAP5Q8WYK1 1306 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 H7C4K7 107 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 GSTM5P46439 218 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 TOP3AQ13472 1001 aaPredicted RBP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 FRG1Q14331 258 aaKnown RBP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 FBXO32Q969P5 355 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 CCDC167Q9P0B6 97 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 ADRA2BP18089 450 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 NR2C2P49116 596 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 PTSQ03393 145 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 STARD3Q14849 445 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 FBXO25Q8TCJ0 367 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 AP4E1Q9UPM8 1137 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 METP08581 1390 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 TMEM94Q12767 1356 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 CES2O00748 559 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 CCNT2O60583 730 aaKnown RBP14.28□□□□□ -0.12
COL4A3-202ENST00000396578 ZNF24P17028 368 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 IRGCQ6NXR0 463 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 FAM126BQ8IXS8 530 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 STK32AQ8WU08 396 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 NT5MQ9NPB1 228 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 L1RE1Q9UN81 338 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.28□□□□□ -0.12
COL4A3-202ENST00000396578 CAPN6Q9Y6Q1 641 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 MYH8P13535 1937 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 ENO2P09104 434 aaPredicted RBP14.28□□□□□ -0.12
COL4A3-202ENST00000396578 VDRP11473 427 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 ALDH7A1P49419 539 aaKnown RBP14.28□□□□□ -0.12
COL4A3-202ENST00000396578 FAM182BQ5T319 152 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 TAF8Q7Z7C8 310 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 SLC47A2Q86VL8 602 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 SP8Q8IXZ3 490 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 C8orf59Q8N0T1 100 aaPredicted RBP14.28□□□□□ -0.12
COL4A3-202ENST00000396578 COLGALT1Q8NBJ5 622 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 CHID1Q9BWS9 393 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 ARHGAP28Q9P2N2 729 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 CRNNQ9UBG3 495 aaPredicted RBP14.28□□□□□ -0.12
COL4A3-202ENST00000396578 OXCT1P55809 520 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 INO80DQ53TQ3 878 aaPredicted RBP14.28□□□□□ -0.12
COL4A3-202ENST00000396578 LIN54Q6MZP7 749 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 PTAR1Q7Z6K3 402 aaPredicted RBP14.28□□□□□ -0.12
COL4A3-202ENST00000396578 CARNMT1Q8N4J0 409 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 ZSCAN18Q8TBC5 510 aaPredicted RBP14.28□□□□□ -0.12
COL4A3-202ENST00000396578 REPS1Q96D71 796 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 AP3M1Q9Y2T2 418 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 C2CD2LO14523 706 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 USP7Q93009 1102 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 SHOC2Q9UQ13 582 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 NEO1Q92859 1461 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 LCA5LO95447 670 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 FGFR3P22607 806 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 STARP49675 285 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 FBXO39Q8N4B4 442 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 TCP10LQ8TDR4 215 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 GTF3C2Q8WUA4 911 aaPredicted RBP14.28□□□□□ -0.12
COL4A3-202ENST00000396578 UCMAQ8WVF2 138 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 REEP1Q9H902 201 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 INVSQ9Y283 1065 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 POU6F1Q14863 301 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 STRIP1Q5VSL9 837 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 SCARA3Q6AZY7 606 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 KCNMB4Q86W47 210 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 WDR60Q8WVS4 1066 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 SPIRE2Q8WWL2 714 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 SLC9A7Q96T83 725 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 COQ6Q9Y2Z9 468 aa14.28□□□□□ -0.12
COL4A3-202ENST00000396578 CYP2C9P11712 490 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 SPIRE1Q08AE8 756 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 GNA13Q14344 377 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 SPOCD1Q6ZMY3 1216 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 SEMA4DQ92854 862 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 KCNH7Q9NS40 1196 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 PXDNLA1KZ92 1463 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 C15orf38-AP3S2A0A0A6YYH1 394 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 TTLL13PA6NNM8 815 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 FCHO1O14526 889 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 ETS1P14921 441 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 CD151P48509 253 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 NRF1Q16656 503 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 ARPINQ7Z6K5 226 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 HERC6Q8IVU3 1022 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 CDK5RAP1Q96SZ6 601 aaKnown RBP14.27□□□□□ -0.12
COL4A3-202ENST00000396578 MID1IP1Q9NPA3 183 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 EPN2O95208 641 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 LRPAP1P30533 357 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 CHN2P52757 468 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 RHAGQ02094 409 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 ACOT1Q86TX2 421 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 ASB2Q96Q27 587 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms