RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 SLU7O95391 586 aaKnown RBP11.89□□□□□ -0.51
RTN1-203ENST00000395090 ZBED1O96006 694 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 FYNP06241 537 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 HAPLN1P10915 354 aaPredicted RBP11.89□□□□□ -0.51
RTN1-203ENST00000395090 PSMA2P25787 234 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 OR1D2P34982 312 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 PCK1P35558 622 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 MAGEA10P43363 369 aaPredicted RBP11.89□□□□□ -0.51
RTN1-203ENST00000395090 PTPN9P43378 593 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 RABGGTBP53611 331 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 DAOAP59103 153 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 TAS2R40P59535 323 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 RNASE9P60153 205 aaKnown RBP11.89□□□□□ -0.51
RTN1-203ENST00000395090 RAB33AQ14088 237 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 PTPROQ16827 1216 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 TPGS2Q68CL5 300 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 BEND5Q7L4P6 421 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 ERMP1Q7Z2K6 904 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 RHOT1Q8IXI2 618 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 RASGEF1CQ8N431 466 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 CEP112Q8N8E3 955 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 KLHL23Q8NBE8 558 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 SPATA17Q96L03 361 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 CEP295NLQ96MC4 621 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 PSMB7Q99436 277 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 DDX23Q9BUQ8 820 aaKnown RBP11.89□□□□□ -0.51
RTN1-203ENST00000395090 PLVAPQ9BX97 442 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 RXFP1Q9HBX9 757 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 FNIP2Q9P278 1114 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 MAFFQ9ULX9 164 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 LZTS1Q9Y250 596 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.89□□□□□ -0.51
RTN1-203ENST00000395090 WDR27A2RRH5 827 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 LCHNA4D1U4 455 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 LRCH4O75427 683 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 ENDOD1O94919 500 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 CELA3AP09093 270 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 CTSAP10619 480 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 MATKP42679 507 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 MARCKSL1P49006 195 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 DGKGP49619 791 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 ROR1Q01973 937 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 ITIH3Q06033 890 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 C9orf50Q5SZB4 431 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 DCAF12L1Q5VU92 463 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 POLNQ7Z5Q5 900 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 ACTRT1Q8TDG2 376 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 NDRG1Q92597 394 aaKnown RBP11.89□□□□□ -0.51
RTN1-203ENST00000395090 PGLYRP2Q96PD5 576 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 SLC2A13Q96QE2 648 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 NCAPGQ9BPX3 1015 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 ULBP1Q9BZM6 244 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 ZBP1Q9H171 429 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 POPDC2Q9HBU9 364 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.89□□□□□ -0.51
RTN1-203ENST00000395090 MRPL17Q9NRX2 175 aaKnown RBP11.89□□□□□ -0.51
RTN1-203ENST00000395090 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.89□□□□□ -0.51
RTN1-203ENST00000395090 AFF4Q9UHB7 1163 aaKnown RBP11.89□□□□□ -0.51
RTN1-203ENST00000395090 SSX2IPQ9Y2D8 614 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 RWDD3Q9Y3V2 267 aa11.89□□□□□ -0.51
RTN1-203ENST00000395090 FAM92AA1XBS5 289 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 LINC01553A4QN01 128 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 YJEFN3A6XGL0 299 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 E7ENQ6 273 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 C5orf67F2Z3F1 127 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 LINC01387J3KSC0 135 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 RNF8O76064 485 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 URODP06132 367 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 PYGMP11217 842 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 ATF2P15336 505 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 RPL17P18621 184 aaKnown RBP11.88□□□□□ -0.51
RTN1-203ENST00000395090 SDC4P31431 198 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 TUFMP49411 452 aaKnown RBP11.88□□□□□ -0.51
RTN1-203ENST00000395090 ARPP19P56211 112 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 RWDD2BP57060 319 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 RPL10AP62906 217 aaKnown RBP11.88□□□□□ -0.51
RTN1-203ENST00000395090 DUSP4Q13115 394 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 SHHQ15465 462 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 DDR2Q16832 855 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 DAB2IPQ5VWQ8 1189 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 BNIPLQ7Z465 357 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 KATNAL2Q8IYT4 538 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 NUP93Q8N1F7 819 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 TTC9BQ8N6N2 239 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 MNS1Q8NEH6 495 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 MYRIPQ8NFW9 859 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 SCAMP5Q8TAC9 235 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 MS4A14Q96JA4 679 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 RPGRIP1Q96KN7 1286 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 NPY6RQ99463 290 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 TRIM56Q9BRZ2 755 aaKnown RBP11.88□□□□□ -0.51
RTN1-203ENST00000395090 CARD6Q9BX69 1037 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 COMMD8Q9NX08 183 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 IRAK3Q9Y616 596 aa11.88□□□□□ -0.51
RTN1-203ENST00000395090 SOX1O00570 391 aaPredicted RBP11.87□□□□□ -0.51
RTN1-203ENST00000395090 CEP104O60308 925 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 DAB1O75553 588 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 NID1P14543 1247 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 TCF4P15884 667 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 MIPP30301 263 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms