RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 DNAJB2P25686 324 aa15.45■□□□□ 0.06
MKS1-202ENST00000393119 SSTR1P30872 391 aa15.45■□□□□ 0.06
MKS1-202ENST00000393119 OR1D2P34982 312 aa15.45■□□□□ 0.06
MKS1-202ENST00000393119 SEMA3BQ13214 749 aa15.45■□□□□ 0.06
MKS1-202ENST00000393119 MORF4L2Q15014 288 aa15.45■□□□□ 0.06
MKS1-202ENST00000393119 EFTUD2Q15029 972 aaKnown RBP eCLIP15.45■□□□□ 0.062e-7■■□□□ 14.1
MKS1-202ENST00000393119 C14orf80Q86SX3 495 aa15.45■□□□□ 0.06
MKS1-202ENST00000393119 LRRC43Q8N309 656 aa15.45■□□□□ 0.06
MKS1-202ENST00000393119 PTPRDP23468 1912 aa15.45■□□□□ 0.06
MKS1-202ENST00000393119 IGLV3-25P01717 112 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 ATF6P18850 670 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 GPX6P59796 221 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 TPI1P60174 286 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 TAF10Q12962 218 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 EIF4EBP2Q13542 120 aaPredicted RBP15.44■□□□□ 0.06
MKS1-202ENST00000393119 BBS9Q3SYG4 887 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 SLC45A4Q5BKX6 768 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 ARTNQ5T4W7 220 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 RWDD4Q6NW29 188 aaKnown RBP15.44■□□□□ 0.06
MKS1-202ENST00000393119 FBXO46Q6PJ61 603 aaPredicted RBP15.44■□□□□ 0.06
MKS1-202ENST00000393119 ARHGAP36Q6ZRI8 547 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 DENND5BQ6ZUT9 1274 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 MIB1Q86YT6 1006 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 PPIL6Q8IXY8 311 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 FBXO22Q8NEZ5 403 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 IRGQQ8WZA9 623 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 OLFM3Q96PB7 478 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 CAPS2Q9BXY5 557 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 C11orf49Q9H6J7 331 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 BCLAF3A2AJT9 711 aaKnown RBP15.44■□□□□ 0.06
MKS1-202ENST00000393119 H3BRJ5 948 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 EPHB2P29323 1055 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 EFEMP1Q12805 493 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 AUHQ13825 339 aaKnown RBP15.44■□□□□ 0.06
MKS1-202ENST00000393119 CNKSR3Q6P9H4 555 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 TRMT10CQ7L0Y3 403 aaKnown RBP15.44■□□□□ 0.06
MKS1-202ENST00000393119 TOP1MTQ969P6 601 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 PGAP3Q96FM1 320 aaPredicted RBP15.44■□□□□ 0.06
MKS1-202ENST00000393119 SEZ6LQ9BYH1 1024 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 COL4A6Q14031 1691 aa15.44■□□□□ 0.06
MKS1-202ENST00000393119 ARHGEF37A1IGU5 675 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 GOLGA6L10A6NI86 522 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 IRAK2O43187 625 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 PAGE1O75459 146 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 SEC24AO95486 1093 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 APRTP07741 180 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 NR1D1P20393 614 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 STIP1P31948 543 aaKnown RBP15.43■□□□□ 0.06
MKS1-202ENST00000393119 CAV1Q03135 178 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 SMAD1Q15797 465 aaKnown RBP15.43■□□□□ 0.06
MKS1-202ENST00000393119 NFE2Q16621 373 aaPredicted RBP15.43■□□□□ 0.06
MKS1-202ENST00000393119 BBOF1Q8ND07 529 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 P2RY11Q96G91 374 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 IGSF21Q96ID5 467 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 FRMD8P1Q9BZ68 369 aaPredicted RBP15.43■□□□□ 0.06
MKS1-202ENST00000393119 CXorf56Q9H5V9 222 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 PNPLA8Q9NP80 782 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 ABCC13Q9NSE7 274 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 MPP6Q9NZW5 540 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 FNDC1Q4ZHG4 1894 aaPredicted RBP15.43■□□□□ 0.06
MKS1-202ENST00000393119 CLUHO75153 1309 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 RASGRF2O14827 1237 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 FSBPO95073 299 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 SPATA31D3P0C874 917 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 GPR17Q13304 367 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 KCNJ11Q14654 390 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 HIF1AQ16665 826 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 EMC10Q5UCC4 262 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 FBXW10Q5XX13 1052 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 SPATA31D4Q6ZUB0 917 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 C16orf59Q7L2K0 433 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 CCHCR1Q8TD31 782 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 BCAS4Q8TDM0 211 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 QKIQ96PU8 341 aaKnown RBP eCLIP15.43■□□□□ 0.06
MKS1-202ENST00000393119 CCSER2Q9H7U1 834 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 VPS37BQ9H9H4 285 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 NEU3Q9UQ49 428 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 CHMP2BQ9UQN3 213 aa15.43■□□□□ 0.06
MKS1-202ENST00000393119 SPARCL1Q14515 664 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 FBXO36Q8NEA4 188 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 TFB1MQ8WVM0 346 aaKnown RBP15.42■□□□□ 0.06
MKS1-202ENST00000393119 HTR3CQ8WXA8 447 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 FBXO32Q969P5 355 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 NTAN1Q96AB6 310 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 MYEOVQ96EZ4 313 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 C8orf48Q96LL4 319 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 CLSTN3Q9BQT9 956 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 MRPL9Q9BYD2 267 aaKnown RBP15.42■□□□□ 0.06
MKS1-202ENST00000393119 OR6C75A6NL08 312 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 HOXA2O43364 376 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 RAG1P15918 1043 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 PAX3P23760 479 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 GCAP28676 217 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 WDR5P61964 334 aaKnown RBP15.42■□□□□ 0.06
MKS1-202ENST00000393119 SCAPQ12770 1279 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 HEATR6Q6AI08 1181 aaKnown RBP15.42■□□□□ 0.06
MKS1-202ENST00000393119 VSTM1Q6UX27 236 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 MPP5Q8N3R9 675 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 FUBP3Q96I24 572 aaKnown RBP eCLIP15.42■□□□□ 0.06
MKS1-202ENST00000393119 FCRL2Q96LA5 508 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms