RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 KCNMA1Q12791 1236 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 TRMT5Q32P41 509 aaKnown RBP12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 IRAK1BP1Q5VVH5 260 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 OLFML2BQ68BL8 750 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 EDEM1Q92611 657 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 KANSL1LA0AUZ9 987 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 PHLPP1O60346 1717 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 SEC24CP53992 1094 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 MYBPC2Q14324 1141 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 FDXACB1Q9BRP7 624 aaPredicted RBP12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 DCLK3Q9C098 648 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 TRIM66O15016 1216 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 RPN2P04844 631 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 ADORA2AP29274 412 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 ITGA9Q13797 1035 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 N4BP2L1Q5TBK1 243 aaPredicted RBP12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 VPS33AQ96AX1 596 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 RGS18Q9NS28 235 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 MPP3Q13368 585 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 SOCS4Q8WXH5 440 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 SERPINB11Q96P15 392 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 NCOA3Q9Y6Q9 1424 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 NDUFB5O43674 189 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 RARGP13631 454 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 KRR1Q13601 381 aaKnown RBP12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 TFAP2DQ7Z6R9 452 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 LPCAT1Q8NF37 534 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 IL25Q9H293 177 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 TP53BP1Q12888 1972 aaPredicted RBP12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 CSDE1O75534 798 aaKnown RBP12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 FEN1P39748 380 aaKnown RBP12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 NUP107P57740 925 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 TRIM16LQ309B1 348 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 CDKAL1Q5VV42 579 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 MYCBPAPQ8TBZ2 947 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 DPF3Q92784 378 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 C1QTNF7Q9BXJ2 289 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 GANQ9H2C0 597 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 DUSP10Q9Y6W6 482 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 MAPK9P45984 424 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 ACOX1Q15067 660 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 MTSS1LQ765P7 747 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 KCNMB4Q86W47 210 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 CPNE1Q99829 537 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 CDC42EP4Q9H3Q1 356 aaKnown RBP12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 TMEM51Q9NW97 253 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 CAPN6Q9Y6Q1 641 aa12.6□□□□□ -0.39
KCNQ3-201ENST00000388996 RGL2O15211 777 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 PSMC3P17980 439 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 CD151P48509 253 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 TGFB2P61812 414 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 CDH17Q12864 832 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 AGKQ53H12 422 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 CYP4Z2PQ8N1L4 340 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 DLGAP2Q9P1A6 1054 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 TK2O00142 265 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 MPOP05164 745 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 OR1E1P30953 314 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 CSHL1Q14406 222 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 FAM171A1Q5VUB5 890 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 ENOPH1Q9UHY7 261 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 TSPAN16Q9UKR8 245 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 DNAJC16Q9Y2G8 782 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 NAB1Q13506 487 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 TCF7L2Q9NQB0 619 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 BATF3Q9NR55 127 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 AMHP03971 560 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 NQO1P15559 274 aaKnown RBP12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 GRK2P25098 689 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 MTDHQ86UE4 582 aaKnown RBP12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 THAP1Q9NVV9 213 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 NEURL4Q96JN8 1562 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 PTENP60484 403 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 SKP1P63208 163 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 EMC1Q8N766 993 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 KIAA0895Q8NCT3 520 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 ELOVL4Q9GZR5 314 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 CLTBP09497 229 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 FIGNQ5HY92 759 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 ZNF544Q6NX49 715 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 SLC2A14Q8TDB8 520 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 COL5A2P05997 1499 aaPredicted RBP12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 RAD51BO15315 384 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 EIF2S1P05198 315 aaKnown RBP12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 ALDH9A1P49189 494 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 NT5DC3Q86UY8 548 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 MCOLN2Q8IZK6 566 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 TMEM159Q96B96 161 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 C4BPBP20851 252 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 PPIL2Q13356 520 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 NBPF12Q5TAG4 269 aaPredicted RBP12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 ILDR2Q71H61 639 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 NIPA1Q7RTP0 329 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 SLC5A5Q92911 643 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 COMMD8Q9NX08 183 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 GVINP1Q7Z2Y8 2422 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 POMCP01189 267 aa12.59□□□□□ -0.39
KCNQ3-201ENST00000388996 BGNP21810 368 aa12.58□□□□□ -0.39
KCNQ3-201ENST00000388996 MARC1Q5VT66 337 aa12.58□□□□□ -0.39
KCNQ3-201ENST00000388996 ZDHHC17Q8IUH5 632 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms