RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 EFEMP1Q12805 493 aa11.31□□□□□ -0.6
FAM239A-201ENST00000381108 SMARCB1Q12824 385 aa11.31□□□□□ -0.6
FAM239A-201ENST00000381108 PPIGQ13427 754 aaKnown RBP eCLIP11.31□□□□□ -0.6
FAM239A-201ENST00000381108 UBE2Q1Q7Z7E8 422 aa11.31□□□□□ -0.6
FAM239A-201ENST00000381108 MIB1Q86YT6 1006 aa11.31□□□□□ -0.6
FAM239A-201ENST00000381108 OXCT2Q9BYC2 517 aaPredicted RBP11.31□□□□□ -0.6
FAM239A-201ENST00000381108 FAM129AQ9BZQ8 928 aa11.31□□□□□ -0.6
FAM239A-201ENST00000381108 ADAM7Q9H2U9 754 aa11.31□□□□□ -0.6
FAM239A-201ENST00000381108 RCOR3Q9P2K3 495 aaPredicted RBP11.31□□□□□ -0.6
FAM239A-201ENST00000381108 BACE2Q9Y5Z0 518 aa11.31□□□□□ -0.6
FAM239A-201ENST00000381108 RTN3O95197 1032 aaPredicted RBP11.3□□□□□ -0.6
FAM239A-201ENST00000381108 GJB5O95377 273 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 SEC24AO95486 1093 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 RARGP13631 454 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 RPL22P35268 128 aaKnown RBP11.3□□□□□ -0.6
FAM239A-201ENST00000381108 RPL10AP62906 217 aaKnown RBP11.3□□□□□ -0.6
FAM239A-201ENST00000381108 BASP1P80723 227 aaKnown RBP11.3□□□□□ -0.6
FAM239A-201ENST00000381108 DSG1Q02413 1049 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 MTM1Q13496 603 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 DPYSQ14117 519 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 RASIP1Q5U651 963 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 RHBDF2Q6PJF5 856 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 BEND5Q7L4P6 421 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 SPATS2Q86XZ4 545 aaKnown RBP11.3□□□□□ -0.6
FAM239A-201ENST00000381108 TP53INP2Q8IXH6 220 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 UHMK1Q8TAS1 419 aaKnown RBP11.3□□□□□ -0.6
FAM239A-201ENST00000381108 C2orf15Q8WU43 125 aaKnown RBP11.3□□□□□ -0.6
FAM239A-201ENST00000381108 LGMNQ99538 433 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 TXLNGYQ9BZA5 131 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 CYP4F11Q9HBI6 524 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 AAASQ9NRG9 546 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 XPO7Q9UIA9 1087 aaKnown RBP11.3□□□□□ -0.6
FAM239A-201ENST00000381108 SLC38A8A6NNN8 435 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 LRIG2O94898 1065 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 ERCC2P18074 760 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 EPHB2P29323 1055 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 CCR1P32246 355 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 SEMA3BQ13214 749 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 DNAJC21Q5F1R6 531 aaKnown RBP11.3□□□□□ -0.6
FAM239A-201ENST00000381108 HIBCHQ6NVY1 386 aaPredicted RBP11.3□□□□□ -0.6
FAM239A-201ENST00000381108 RWDD4Q6NW29 188 aaKnown RBP11.3□□□□□ -0.6
FAM239A-201ENST00000381108 LRRC31Q6UY01 552 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 KDM7AQ6ZMT4 941 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 CROCCP2Q86T23 111 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 BBOF1Q8ND07 529 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 ZNF461Q8TAF7 563 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 SPATA17Q96L03 361 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 SERPINB11Q96P15 392 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 EPAS1Q99814 870 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 HERC2P3Q9BVR0 1158 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 SEMA4AQ9H3S1 761 aa11.3□□□□□ -0.6
FAM239A-201ENST00000381108 TLR8Q9NR97 1041 aaKnown RBP11.3□□□□□ -0.6
FAM239A-201ENST00000381108 TPX2Q9ULW0 747 aaKnown RBP11.3□□□□□ -0.6
FAM239A-201ENST00000381108 EIF3HO15372 352 aaKnown RBP eCLIP11.29□□□□□ -0.6
FAM239A-201ENST00000381108 PAGE1O75459 146 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 HMBSP08397 361 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 NR2C2P49116 596 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 EIF3BP55884 814 aaKnown RBP11.29□□□□□ -0.6
FAM239A-201ENST00000381108 CAV1Q03135 178 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 GAD2Q05329 585 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 EIF4EBP2Q13542 120 aaPredicted RBP11.29□□□□□ -0.6
FAM239A-201ENST00000381108 CAMK2BQ13554 666 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 C10orf120Q5SQS8 335 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 HP1BP3Q5SSJ5 553 aaPredicted RBP11.29□□□□□ -0.6
FAM239A-201ENST00000381108 RNASEH2BQ5TBB1 312 aaKnown RBP11.29□□□□□ -0.6
FAM239A-201ENST00000381108 DDX53Q86TM3 631 aaKnown RBP11.29□□□□□ -0.6
FAM239A-201ENST00000381108 ARHGAP18Q8N392 663 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 FIBCD1Q8N539 461 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 CCDC110Q8TBZ0 833 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 CENPHQ9H3R5 247 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 CCSER2Q9H7U1 834 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 USP29Q9HBJ7 922 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 ARHGEF38Q9NXL2 777 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 IL37Q9NZH6 218 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 AFF4Q9UHB7 1163 aaKnown RBP11.29□□□□□ -0.6
FAM239A-201ENST00000381108 PCDHB12Q9Y5F1 795 aa11.29□□□□□ -0.6
FAM239A-201ENST00000381108 FAM92AA1XBS5 289 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 F5H423 210 aaPredicted RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 DCLK1O15075 740 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 FGF18O76093 207 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 ACSL3O95573 720 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 SPATA31D3P0C874 917 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 MYZAPP0CAP1 466 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 STIP1P31948 543 aaKnown RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 PPM1AP35813 382 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 TUFMP49411 452 aaKnown RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 IRAK1P51617 712 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 AP1B1Q10567 949 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 SLMAPQ14BN4 828 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 SLC45A4Q5BKX6 768 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 TMEM240Q5SV17 173 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 CEP85LQ5SZL2 805 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 FAXCQ5TGI0 409 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 ANKRD22Q5VYY1 191 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 DENND2CQ68D51 928 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 HEATR6Q6AI08 1181 aaKnown RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 SPATA31D4Q6ZUB0 917 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 CDKL3Q8IVW4 592 aaPredicted RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 NPWQ8N729 165 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 EFCAB3Q8N7B9 438 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms