RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 DBX2Q6ZNG2 339 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 GATAD2AQ86YP4 633 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 ZNF276Q8N554 614 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 EDEM1Q92611 657 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 IGSF8Q969P0 613 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 ULBP1Q9BZM6 244 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 PCED1AQ9H1Q7 454 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 MTG2Q9H4K7 406 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 MAPK8IP1Q9UQF2 711 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 SHROOM3Q8TF72 1996 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 MUC22E2RYF6 1773 aaPredicted RBP18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 K7ELQ4 463 aaPredicted RBP18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 CBX4O00257 560 aa18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 MSI1O43347 362 aaKnown RBP18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 ACTN4O43707 911 aaKnown RBP18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 ABCG1P45844 678 aa18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 SGSHP51688 502 aa18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 BCAT1P54687 386 aa18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 CAMK2BQ13554 666 aa18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 GOLGA7BQ2TAP0 167 aa18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 FAM186BQ8IYM0 893 aa18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 PDCD7Q8N8D1 485 aaKnown RBP18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 WFIKKN2Q8TEU8 576 aa18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 TMEM245Q9H330 911 aa18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 PRSS16Q9NQE7 514 aa18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 DKK4Q9UBT3 224 aa18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 GGA2Q9UJY4 613 aa18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 PLXNA2O75051 1894 aa18.56■□□□□ 0.56
PDLIM4-202ENST00000379018 KNTC1P50748 2209 aa18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 TULP2O00295 520 aa18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 ZBED1O96006 694 aa18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 SLFN14P0C7P3 912 aa18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 PABPC1P11940 636 aaKnown RBP18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 CD27P26842 260 aa18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 SLC8A3P57103 927 aa18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 PTPRNQ16849 979 aa18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 INAVAQ3KP66 663 aa18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 MBLAC2Q68D91 279 aa18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 INTS8Q75QN2 995 aaKnown RBP18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 SLC4A11Q8NBS3 891 aa18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 RNF139Q8WU17 664 aa18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 TMA16Q96EY4 203 aaKnown RBP18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 TMEM176AQ96HP8 235 aa18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 SLC6A18Q96N87 628 aa18.55■□□□□ 0.56
PDLIM4-202ENST00000379018 CTSKP43235 329 aa18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 ADIGQ0VDE8 80 aa18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 TRIP4Q15650 581 aaPredicted RBP18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 SMAD1Q15797 465 aaKnown RBP18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 ZNF776Q68DI1 518 aaPredicted RBP18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 RFWD3Q6PCD5 774 aa18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 ADIPOR2Q86V24 386 aa18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 SCUBE3Q8IX30 993 aa18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 FAM217AQ8IXS0 508 aa18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 ZC3H3Q8IXZ2 948 aaKnown RBP18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 AHI1Q8N157 1196 aa18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 WFDC5Q8TCV5 224 aa18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 SEMA4DQ92854 862 aa18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 IPO9Q96P70 1041 aaKnown RBP18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 ACE2Q9BYF1 805 aaPredicted RBP18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 LRRC4Q9HBW1 653 aa18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 CISHQ9NSE2 258 aa18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 STIM2Q9P246 746 aa18.54■□□□□ 0.56
PDLIM4-202ENST00000379018 PCDHGA12O60330 932 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 TBL1XO60907 577 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 JUPP14923 745 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 POLR2EP19388 210 aaKnown RBP18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 ITPKBP27987 946 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 CD70P32970 193 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 RAD23BP54727 409 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 SEMG2Q02383 582 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 DNAJC3Q13217 504 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 RAB41Q5JT25 222 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 KIAA0895LQ68EN5 471 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 TATDN2Q93075 761 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 EEF2KMTQ96G04 330 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 SGK2Q9HBY8 427 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 TMEM8AQ9HCN3 771 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 AASDHPPTQ9NRN7 309 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 OLA1Q9NTK5 396 aaKnown RBP18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 NCKAP1Q9Y2A7 1128 aa18.53■□□□□ 0.56
PDLIM4-202ENST00000379018 A0A087WV48 116 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 A0A1B0GVL5 298 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 F13A1P00488 732 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 ATP5BP06576 529 aaKnown RBP18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 DLDP09622 509 aaKnown RBP18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 PRR29P0C7W0 189 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 CD19P15391 556 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 ABCB4P21439 1286 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 PDE4CQ08493 712 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 KRT39Q6A163 491 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 SIX6OS1Q8N1H7 587 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 ANKRD52Q8NB46 1076 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 ADAM32Q8TC27 787 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 TMEM174Q8WUU8 243 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 NXPE2Q96DL1 559 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 CNDP2Q96KP4 475 aaKnown RBP18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 OSGEPQ9NPF4 335 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 FBXL12Q9NXK8 326 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 SERGEFQ9UGK8 458 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 TSPAN16Q9UKR8 245 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms