RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 JPH3Q8WXH2 748 aaPredicted RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 PROX1Q92786 737 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 DMRTB1Q96MA1 342 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 HEMGNQ9BXL5 484 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 QTRT2Q9H974 415 aaKnown RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 COQ3Q9NZJ6 369 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 CFL2Q9Y281 166 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 CLRN2A0PK11 232 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 KCNJ13O60928 360 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 CREB1P16220 341 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 PCSK6P29122 969 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 HNF1BP35680 557 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 COILP38432 576 aaPredicted RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 ALCAMQ13740 583 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 FAM47CQ5HY64 1035 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 PAGE2BQ5JRK9 111 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 NSMFQ6X4W1 530 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 DPH6Q7L8W6 267 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 SLC22A16Q86VW1 577 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 BEST2Q8NFU1 509 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 SPOCK2Q92563 424 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 YME1L1Q96TA2 773 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 KLF6Q99612 283 aaPredicted RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 ZNF577Q9BSK1 485 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 FOXP3Q9BZS1 431 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 STK32BQ9NY57 414 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 SRP68Q9UHB9 627 aaKnown RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 BMP3P12645 472 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 ZNF3P17036 446 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 FGFR2P21802 821 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 P2RX3P56373 397 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 CTTNQ14247 550 aaKnown RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 GPR162Q16538 588 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 IQSEC1Q6DN90 963 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 VSTM1Q6UX27 236 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 DNAJC11Q9NVH1 559 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 WHRNQ9P202 907 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 SPATA2Q9UM82 520 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 EMSYQ7Z589 1322 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 TEX51A0A1B0GUA7 166 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 CLOCKO15516 846 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 CD4P01730 458 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 YES1P07947 543 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 CD19P15391 556 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 PON1P27169 355 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 EMP3P54852 163 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 SNX16P57768 344 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 IDO2Q6ZQW0 420 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 CAMK1DQ8IU85 385 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 FAM47BQ8NA70 645 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 DAGLBQ8NCG7 672 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 RSAD2Q8WXG1 361 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 E2F7Q96AV8 911 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 PACSIN1Q9BY11 444 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 ZDHHC7Q9NXF8 308 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 TCRBV5S4A2TA0A5A2 114 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 ISPDA4D126 451 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 POLR1CO15160 346 aaPredicted RBP12.06□□□□□ -0.48
NPHP4-202ENST00000378161 MED26O95402 600 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 ATP5BP06576 529 aaKnown RBP12.06□□□□□ -0.48
NPHP4-202ENST00000378161 IL10P22301 178 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 PKLRP30613 574 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 DMP1Q13316 513 aaPredicted RBP12.06□□□□□ -0.48
NPHP4-202ENST00000378161 ARMC4Q5T2S8 1044 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 BNC2Q6ZN30 1099 aaPredicted RBP12.06□□□□□ -0.48
NPHP4-202ENST00000378161 ANGPTL6Q8NI99 470 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 ZFPM2Q8WW38 1151 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 C1orf54Q8WWF1 131 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 APOL4Q9BPW4 351 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 NUDT12Q9BQG2 462 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 TOR3AQ9H497 397 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 TLE6Q9H808 572 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 KCNK4Q9NYG8 393 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 NUP50Q9UKX7 468 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 PRR23AA6NEV1 266 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 USP17L15C9J2P7 530 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 USP17L13C9JLJ4 530 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 USP17L11C9JVI0 530 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 USP17L18D6R9N7 530 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 USP17L22D6RA61 530 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 USP17L17D6RBQ6 530 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 USP17L19D6RCP7 530 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 USP17L20D6RJB6 530 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 PDXKO00764 312 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 CDK2AP1O14519 115 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 CLPXO76031 633 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 GARTP22102 1010 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 F8A1P23610 371 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 GPC5P78333 572 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 USP17L24Q0WX57 530 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 USP17L6PQ6QN14 398 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 SH3RF1Q7Z6J0 888 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 DLG3Q92796 817 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 PANX3Q96QZ0 392 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 MIPEPQ99797 713 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 TSEN34Q9BSV6 310 aaKnown RBP12.06□□□□□ -0.48
NPHP4-202ENST00000378161 CEPT1Q9Y6K0 416 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 CACNA1FO60840 1977 aa12.06□□□□□ -0.48
NPHP4-202ENST00000378161 KRT87PA6NCN2 255 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms