RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ANAPC2Q9UJX6 822 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 UBQLN1Q9UMX0 589 aaKnown RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 MTF2Q9Y483 593 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 BAIAP3O94812 1187 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 ECDO95905 644 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 FECHP22830 423 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 PTX3P26022 381 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 CSE1LP55060 971 aaKnown RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 TYSND1Q2T9J0 566 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 AHSPQ9NZD4 102 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 EDF1O60869 148 aaKnown RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 GUCA1CO95843 209 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 TGFB3P10600 412 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 PPIBP23284 216 aaKnown RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 OXCT1P55809 520 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 NCALDP61601 193 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 PSMC6P62333 389 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 KIAA0408Q6ZU52 694 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 CHSY1Q86X52 802 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 TBC1D21Q8IYX1 336 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 KIAA1683Q9H0B3 1180 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 PDGFCQ9NRA1 345 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 CLTCQ00610 1675 aaKnown RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 C5orf60A6NFR6 353 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 MLYCDO95822 493 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 PLEKP08567 350 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 TCF3P15923 654 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 PRR5LQ6MZQ0 368 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 CASP12Q6UXS9 341 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SLC39A8Q9C0K1 460 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SEMA6BQ9H3T3 888 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SIK3Q9Y2K2 1263 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 TRIM38O00635 465 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 CYP27B1O15528 508 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 MYBP10242 640 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 ARPC4P59998 168 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 GTF2H3Q13889 308 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 FAM187BQ17R55 369 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SLC5A9Q2M3M2 681 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SPOUT1Q5T280 376 aaKnown RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 KIF12Q96FN5 646 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 PPP1R10Q96QC0 940 aaKnown RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 RMI1Q9H9A7 625 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SH3BP4Q9P0V3 963 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 MAGEL2Q9UJ55 1249 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SETD1AO15047 1707 aaKnown RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 GAKO14976 1311 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 ARHGAP23Q9P227 1491 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 DDX3XO00571 662 aaKnown RBP eCLIP10.42□□□□□ -0.74
PTCH1-204ENST00000375290 AP5Z1O43299 807 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 HBP1O60381 514 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 GABRB2P47870 512 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 LPIN1Q14693 890 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 ZCCHC8Q6NZY4 707 aaKnown RBP10.42□□□□□ -0.74
PTCH1-204ENST00000375290 TXNDC11Q6PKC3 985 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 GADL1Q6ZQY3 521 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 PURBQ96QR8 312 aaKnown RBP10.42□□□□□ -0.74
PTCH1-204ENST00000375290 MYO5BQ9ULV0 1848 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 LLGL1Q15334 1064 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 NOTUMQ6P988 496 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 USP49Q70CQ1 688 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 FASTKD5Q7L8L6 764 aaKnown RBP10.42□□□□□ -0.74
PTCH1-204ENST00000375290 DCP1BQ8IZD4 617 aaKnown RBP10.42□□□□□ -0.74
PTCH1-204ENST00000375290 ACTL9Q8TC94 416 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 HM13Q8TCT9 377 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 PARD3BQ8TEW8 1205 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 RAB2BQ8WUD1 216 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 ADGRE3Q9BY15 652 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 JMJD4Q9H9V9 463 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 NDFIP2Q9NV92 336 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 RAP2CQ9Y3L5 183 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 PIK3C2BO00750 1634 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 TULP3O75386 442 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 FARP2O94887 1054 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-204ENST00000375290 FASTKQ14296 549 aaKnown RBP10.42□□□□□ -0.74
PTCH1-204ENST00000375290 OR56A4Q8NGH8 313 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 KLHL28Q9NXS3 571 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 LSM7Q9UK45 103 aaKnown RBP10.42□□□□□ -0.74
PTCH1-204ENST00000375290 SPACA6W5XKT8 324 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 SHPRHQ149N8 1683 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 H0YC42 278 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 VEPH1Q14D04 833 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 DCAF6Q58WW2 860 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 GJD3Q8N144 294 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 SLC35C1Q96A29 364 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 ASB7Q9H672 318 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 RNF112Q9ULX5 631 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 VCLP18206 1134 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 C2CD6Q53TS8 623 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 XKRXQ6PP77 449 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 ROPN1LQ96C74 230 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 TCF12Q99081 682 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 LMO7Q8WWI1 1683 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 SPDYE5A6NIY4 337 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 TRMUO75648 421 aaKnown RBP10.42□□□□□ -0.74
PTCH1-204ENST00000375290 ETS1P14921 441 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 NEK3P51956 506 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 NME3Q13232 169 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 PSMD5Q16401 504 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 SPDYE7PQ495Y7 208 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms