RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 FRMPD1Q5SYB0 1578 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 ATP6V1B2P21281 511 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 MGAT5Q09328 741 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 FOXD4Q12950 439 aaPredicted RBP10.5□□□□□ -0.73
CD28-202ENST00000374481 KLHL17Q6TDP4 642 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 FAM20AQ96MK3 541 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 NXF1Q9UBU9 619 aaKnown RBP10.5□□□□□ -0.73
CD28-202ENST00000374481 USP6P35125 1406 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 PRR23AA6NEV1 266 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 WNT7AO00755 349 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 MRASO14807 208 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 TCEA3O75764 348 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 NOL4O94818 638 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 GARTP22102 1010 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 CNTFP26441 200 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 PSME3P61289 254 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 GSTM4Q03013 218 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 TRIM32Q13049 653 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 DNASE1L3Q13609 305 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 MOGSQ13724 837 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 USP10Q14694 798 aaKnown RBP10.5□□□□□ -0.73
CD28-202ENST00000374481 TGFBIQ15582 683 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 IL17AQ16552 155 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 ABCB5Q2M3G0 1257 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 IQSEC1Q6DN90 963 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 MARVELD2Q8N4S9 558 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 SVOPQ8N4V2 548 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 BORCS6Q96GS4 357 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 HERC2P3Q9BVR0 1158 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 UNKQ9C0B0 810 aaKnown RBP10.5□□□□□ -0.73
CD28-202ENST00000374481 COQ10BQ9H8M1 238 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 C8orf4Q9NR00 106 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 ZNF224Q9NZL3 707 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 EHD3Q9NZN3 535 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 KLHL8Q9P2G9 620 aaPredicted RBP10.5□□□□□ -0.73
CD28-202ENST00000374481 VPS4AQ9UN37 437 aa10.5□□□□□ -0.73
CD28-202ENST00000374481 KIF20BQ96Q89 1820 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 SYNJ2BP-COX16A0A087WUM0 186 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 KRT87PA6NCN2 255 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 USP17L5A8MUK1 530 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 MAGEB2O15479 319 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 BANF1O75531 89 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 PDE9AO76083 593 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 PRKD3O94806 890 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 PABPC1P11940 636 aaKnown RBP10.49□□□□□ -0.73
CD28-202ENST00000374481 MYCLP12524 364 aaPredicted RBP10.49□□□□□ -0.73
CD28-202ENST00000374481 NPR1P16066 1061 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 PRKACAP17612 351 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 GLRA2P23416 452 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 UBXN2AP68543 259 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 HERC3Q15034 1050 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 PLCL1Q15111 1095 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 TLR1Q15399 786 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 SLFN11Q7Z7L1 901 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 ADGRG6Q86SQ4 1221 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 ASCC1Q8N9N2 400 aaKnown RBP10.49□□□□□ -0.73
CD28-202ENST00000374481 RP9Q8TA86 221 aaKnown RBP10.49□□□□□ -0.73
CD28-202ENST00000374481 ISOC1Q96CN7 298 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 BLOC1S4Q9NUP1 217 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 COX16Q9P0S2 106 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 HESX1Q9UBX0 185 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 SPATA2Q9UM82 520 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 ST14Q9Y5Y6 855 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 COPG1Q9Y678 874 aaKnown RBP10.49□□□□□ -0.73
CD28-202ENST00000374481 CENPBD1B2RD01 187 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 ETS1P14921 441 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 CAPRIN1Q14444 709 aaKnown RBP10.49□□□□□ -0.73
CD28-202ENST00000374481 SEC23AQ15436 765 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 CYP2A13Q16696 494 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 ZNF544Q6NX49 715 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 DAGLBQ8NCG7 672 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 RDM1Q8NG50 284 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 MBOAT7Q96N66 472 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 USE1Q9NZ43 259 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 SAGE2PA6NJ88 616 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 TRIM13O60858 407 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 SLC4A1P02730 911 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 DBTP11182 482 aaKnown RBP10.49□□□□□ -0.73
CD28-202ENST00000374481 IFI30P13284 250 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 PRKAA2P54646 552 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 KLF10Q13118 480 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 ARL13BQ3SXY8 428 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 SCARA5Q6ZMJ2 495 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 SPOCD1Q6ZMY3 1216 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 TDRPQ86YL5 185 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 TOR1AIP2Q8NFQ8 470 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 PSPC1Q8WXF1 523 aaKnown RBP10.49□□□□□ -0.73
CD28-202ENST00000374481 EPB41L1Q9H4G0 881 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 FANCEQ9HB96 536 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 TPRKBQ9Y3C4 175 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 MST1RQ04912 1400 aa10.49□□□□□ -0.73
CD28-202ENST00000374481 MYO1GB0I1T2 1018 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 H2AFYO75367 372 aaKnown RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 LYPLA1O75608 230 aaPredicted RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 TIPRLO75663 272 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 APOA4P06727 396 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 FUT11Q495W5 492 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 C6orf10Q5SRN2 563 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 SLC9A4Q6AI14 798 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 PADI6Q6TGC4 694 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms