RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 A0A0A0MRY4 1105 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 GOLGA8SH3BPF8 625 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 SGK1O00141 431 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 GFRA2O00451 464 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 MAP3K13O43283 966 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 SYNCRIPO60506 623 aaKnown RBP9.67□□□□□ -0.86
MRPL55-216ENST00000366744 FOXD2O60548 495 aaPredicted RBP9.67□□□□□ -0.86
MRPL55-216ENST00000366744 RHOBTB1O94844 696 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 MOCS3O95396 460 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 ATP1A3P13637 1013 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 FERP16591 822 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 HOXD9P28356 352 aaPredicted RBP9.67□□□□□ -0.86
MRPL55-216ENST00000366744 CDH5P33151 784 aaPredicted RBP9.67□□□□□ -0.86
MRPL55-216ENST00000366744 SCNN1AP37088 669 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 MATKP42679 507 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 SULT1E1P49888 294 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 JAM2P57087 298 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 CDR2Q01850 454 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 NCAPHQ15003 741 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 FNDC3BQ53EP0 1204 aaKnown RBP9.67□□□□□ -0.86
MRPL55-216ENST00000366744 NAA35Q5VZE5 725 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 EGFLAMQ63HQ2 1017 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 PPP1R2P3Q6NXS1 205 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 SERPINA13PQ6UXR4 307 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 NOP9Q86U38 636 aaKnown RBP9.67□□□□□ -0.86
MRPL55-216ENST00000366744 DHX40Q8IX18 779 aaKnown RBP9.67□□□□□ -0.86
MRPL55-216ENST00000366744 DEFB106AQ8N104 65 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 SUMF1Q8NBK3 374 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 MDGA1Q8NFP4 955 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 FCRL2Q96LA5 508 aaPredicted RBP9.67□□□□□ -0.86
MRPL55-216ENST00000366744 SLC2A13Q96QE2 648 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 ZDHHC4Q9NPG8 344 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 C2orf42Q9NWW7 574 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.67□□□□□ -0.86
MRPL55-216ENST00000366744 USP18Q9UMW8 372 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 STARD13Q9Y3M8 1113 aa9.67□□□□□ -0.86
MRPL55-216ENST00000366744 H0Y626 953 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 M0QYT0 321 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 TRIM24O15164 1050 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 TIMM44O43615 452 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 LRP3O75074 770 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 GABBR2O75899 941 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 F9P00740 461 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 CALB1P05937 261 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 ATP5BP06576 529 aaKnown RBP9.66□□□□□ -0.86
MRPL55-216ENST00000366744 RETP07949 1114 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 MMEP08473 750 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 PABPC1P11940 636 aaKnown RBP9.66□□□□□ -0.86
MRPL55-216ENST00000366744 NOS2P35228 1153 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 WASP42768 502 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 RNASE9P60153 205 aaKnown RBP9.66□□□□□ -0.86
MRPL55-216ENST00000366744 ST8SIA6P61647 398 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 NOMO3P69849 1222 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 LMNB2Q03252 620 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 MESP2Q0VG99 397 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 SRSF5Q13243 272 aaKnown RBP9.66□□□□□ -0.86
MRPL55-216ENST00000366744 GEN1Q17RS7 908 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 FAM133BQ5BKY9 247 aaKnown RBP9.66□□□□□ -0.86
MRPL55-216ENST00000366744 ZC3H12AQ5D1E8 599 aaKnown RBP9.66□□□□□ -0.86
MRPL55-216ENST00000366744 ACBD5Q5T8D3 534 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-216ENST00000366744 SYPL2Q5VXT5 272 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 RNF219Q5W0B1 726 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-216ENST00000366744 RAP1GAP2Q684P5 730 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 RFWD3Q6PCD5 774 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 LRSAM1Q6UWE0 723 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 MMS22LQ6ZRQ5 1243 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 RASSF3Q86WH2 238 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 SFTPA1Q8IWL2 248 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 ABCA7Q8IZY2 2146 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 LGI2Q8N0V4 545 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 CARNMT1Q8N4J0 409 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 ZNF397Q8NF99 534 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-216ENST00000366744 PIWIL1Q96J94 861 aaKnown RBP9.66□□□□□ -0.86
MRPL55-216ENST00000366744 RPRD1AQ96P16 312 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-216ENST00000366744 PPP1R9BQ96SB3 815 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 C11orf70Q9BRQ4 267 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 ABCB8Q9NUT2 735 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 STIM2Q9P246 746 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 GGA2Q9UJY4 613 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 NOCTQ9UK39 431 aaKnown RBP9.66□□□□□ -0.86
MRPL55-216ENST00000366744 MYO6Q9UM54 1294 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 PLA2G4CQ9UP65 541 aa9.66□□□□□ -0.86
MRPL55-216ENST00000366744 TP53BP1Q12888 1972 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-216ENST00000366744 A0A1B0GVM2 712 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 A0A1W2PQC6 194 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 TCAF2A6NFQ2 919 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 LRRC10BA6NIK2 292 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 KCNU1A8MYU2 1149 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 PRRT4C9JH25 899 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 EPHB6O15197 1021 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 ZNF217O75362 1048 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 IGLV3-25P01717 112 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 FYNP06241 537 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 HNRNPLP14866 589 aaKnown RBP eCLIP9.65□□□□□ -0.86
MRPL55-216ENST00000366744 POLR2EP19388 210 aaKnown RBP9.65□□□□□ -0.86
MRPL55-216ENST00000366744 TACR2P21452 398 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 SDC4P31431 198 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 DPP6P42658 865 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 GABRB2P47870 512 aa9.65□□□□□ -0.86
MRPL55-216ENST00000366744 OXCT1P55809 520 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms