RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 APOC4-APOC2K7ER74 178 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 APOC2P02655 101 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 PRKCIP41743 596 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 LHX1P48742 406 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 CAMK2GQ13555 558 aaPredicted RBP15.18■□□□□ 0.02
CHD4-201ENST00000357008 CYP2R1Q6VVX0 501 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 OLFM1Q99784 485 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 HMG20AQ9NP66 347 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 ZSCAN32Q9NX65 697 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 CCDC154A6NI56 674 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 FAM220BPB1ANY3 271 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 STK25O00506 426 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 SLC26A2P50443 739 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 ST13P50502 369 aaKnown RBP15.18■□□□□ 0.02
CHD4-201ENST00000357008 CHMP1BQ7LBR1 199 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 FBXO39Q8N4B4 442 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 ZNF398Q8TD17 642 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 FBXO32Q969P5 355 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 ITGA11Q9UKX5 1188 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHD4-201ENST00000357008 C2CD2Q9Y426 696 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 HACD1B0YJ81 288 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 AUHQ13825 339 aaKnown RBP15.18■□□□□ 0.02
CHD4-201ENST00000357008 TAF1CQ15572 869 aaPredicted RBP15.18■□□□□ 0.02
CHD4-201ENST00000357008 PDZK1Q5T2W1 519 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 TRIQKQ629K1 86 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 ZCCHC23Q6ZST2 131 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 TLK2Q86UE8 772 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 PYDC1Q8WXC3 89 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 ASB2Q96Q27 587 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 MYOZ2Q9NPC6 264 aa15.18■□□□□ 0.02
CHD4-201ENST00000357008 CENPXA8MT69 81 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 FAM25AB3EWG3 89 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 FAM25CB3EWG5 89 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 FAM25GB3EWG6 89 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 TK2O00142 265 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 DNAJB2P25686 324 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 RXRGP48443 463 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 CHN2P52757 468 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 MSLNQ13421 630 aaPredicted RBP15.17■□□□□ 0.02
CHD4-201ENST00000357008 USP39Q53GS9 565 aaKnown RBP15.17■□□□□ 0.02
CHD4-201ENST00000357008 TYW3Q6IPR3 259 aaKnown RBP15.17■□□□□ 0.02
CHD4-201ENST00000357008 ERAP2Q6P179 960 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 FAM228AQ86W67 206 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 CYP4Z2PQ8N1L4 340 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 SPIRE2Q8WWL2 714 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 DEFB129Q9H1M3 183 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 RRN3Q9NYV6 651 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 DYRK1BQ9Y463 629 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 PARNO95453 639 aaKnown RBP15.17■□□□□ 0.02
CHD4-201ENST00000357008 MSH3P20585 1137 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 ARL4DP49703 201 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 FRG1Q14331 258 aaKnown RBP15.17■□□□□ 0.02
CHD4-201ENST00000357008 SPANXN2Q5MJ10 180 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 TTC27Q6P3X3 843 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 NECAB2Q7Z6G3 386 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 FAM126BQ8IXS8 530 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 FNDC5Q8NAU1 212 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 REXO4Q9GZR2 422 aaKnown RBP15.17■□□□□ 0.02
CHD4-201ENST00000357008 MID1IP1Q9NPA3 183 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 STK39Q9UEW8 545 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 LIMD1Q9UGP4 676 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 SALL1Q9NSC2 1324 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 HALP42357 657 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 DPYSL3Q14195 570 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 ANKS6Q68DC2 871 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 DEPDC7Q96QD5 511 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 GRIP2Q9C0E4 1043 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 CCDC167Q9P0B6 97 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 TSPAN16Q9UKR8 245 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 HS6ST1O60243 411 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 RARRES1P49788 294 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 TKTL1P51854 596 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 MARC1Q5VT66 337 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 TMC7Q7Z402 723 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 ZDHHC13Q8IUH4 622 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 PCYOX1Q9UHG3 505 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 C17orf102A2RUQ5 167 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 MAPK11Q15759 364 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 ZNF662Q6ZS27 426 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 C1orf50Q9BV19 199 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 RTFDC1Q9BY42 306 aaPredicted RBP15.17■□□□□ 0.02
CHD4-201ENST00000357008 UNKQ9C0B0 810 aaKnown RBP15.17■□□□□ 0.02
CHD4-201ENST00000357008 SPRTNQ9H040 489 aaPredicted RBP15.17■□□□□ 0.02
CHD4-201ENST00000357008 BLOC1S4Q9NUP1 217 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 TMEM51Q9NW97 253 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 TMX2Q9Y320 296 aa15.17■□□□□ 0.02
CHD4-201ENST00000357008 TPH1P17752 444 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 MRPS22P82650 360 aaKnown RBP15.16■□□□□ 0.02
CHD4-201ENST00000357008 TSHZ1Q6ZSZ6 1077 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 ST13P5Q8NFI4 369 aaPredicted RBP15.16■□□□□ 0.02
CHD4-201ENST00000357008 ZSCAN18Q8TBC5 510 aaPredicted RBP15.16■□□□□ 0.02
CHD4-201ENST00000357008 ZNF483Q8TF39 744 aaPredicted RBP15.16■□□□□ 0.02
CHD4-201ENST00000357008 KIAA1683Q9H0B3 1180 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 SERHL2Q9H4I8 314 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 SERHLQ9NQF3 203 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 FAM237AA0A1B0GTK4 181 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 PIPSLA2A3N6 862 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 ZBTB7AO95365 584 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 GSTT1P30711 240 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms