RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 SND1Q7KZF4 910 aaKnown RBP eCLIP21.15■□□□□ 0.98
CHRD-203ENST00000356534 XYLT1Q86Y38 959 aa21.15■□□□□ 0.98
CHRD-203ENST00000356534 SFTPA1Q8IWL2 248 aa21.15■□□□□ 0.98
CHRD-203ENST00000356534 GAB3Q8WWW8 586 aa21.15■□□□□ 0.98
CHRD-203ENST00000356534 RNF34Q969K3 372 aa21.15■□□□□ 0.98
CHRD-203ENST00000356534 HINFPQ9BQA5 517 aa21.15■□□□□ 0.98
CHRD-203ENST00000356534 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.15■□□□□ 0.98
CHRD-203ENST00000356534 NCDNQ9UBB6 729 aa21.15■□□□□ 0.98
CHRD-203ENST00000356534 GVINP1Q7Z2Y8 2422 aa21.15■□□□□ 0.98
CHRD-203ENST00000356534 DMDP11532 3685 aa21.14■□□□□ 0.98
CHRD-203ENST00000356534 SGK1O00141 431 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 TRIM24O15164 1050 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 TEX33O43247 280 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 TIMM44O43615 452 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 RPP40O75818 363 aaKnown RBP21.14■□□□□ 0.97
CHRD-203ENST00000356534 CHRM1P11229 460 aaPredicted RBP21.14■□□□□ 0.97
CHRD-203ENST00000356534 HOXB2P14652 356 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 NSFP46459 744 aaKnown RBP21.14■□□□□ 0.97
CHRD-203ENST00000356534 ARID5AQ03989 594 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 EIF4EBP2Q13542 120 aaPredicted RBP21.14■□□□□ 0.97
CHRD-203ENST00000356534 TAF5Q15542 800 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 TTC39BQ5VTQ0 682 aaPredicted RBP21.14■□□□□ 0.97
CHRD-203ENST00000356534 EGFLAMQ63HQ2 1017 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 RNF43Q68DV7 783 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 LAIR1Q6GTX8 287 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 PRR23BQ6ZRT6 265 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 ARCQ7LC44 396 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 RASSF3Q86WH2 238 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 CHSY1Q86X52 802 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 CHPFQ8IZ52 775 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 SLC20A1Q8WUM9 679 aa21.14■□□□□ 0.97
CHRD-203ENST00000356534 MUC22E2RYF6 1773 aaPredicted RBP21.14■□□□□ 0.97
CHRD-203ENST00000356534 ABCA7Q8IZY2 2146 aa21.13■□□□□ 0.97
CHRD-203ENST00000356534 USP34Q70CQ2 3546 aa21.13■□□□□ 0.97
CHRD-203ENST00000356534 PRRT4C9JH25 899 aa21.13■□□□□ 0.97
CHRD-203ENST00000356534 TBL1XO60907 577 aa21.13■□□□□ 0.97
CHRD-203ENST00000356534 F9P00740 461 aa21.13■□□□□ 0.97
CHRD-203ENST00000356534 ZC3H12AQ5D1E8 599 aaKnown RBP21.13■□□□□ 0.97
CHRD-203ENST00000356534 BRMS1LQ5PSV4 323 aa21.13■□□□□ 0.97
CHRD-203ENST00000356534 ACBD5Q5T8D3 534 aaPredicted RBP21.13■□□□□ 0.97
CHRD-203ENST00000356534 EMC10Q5UCC4 262 aa21.13■□□□□ 0.97
CHRD-203ENST00000356534 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.13■□□□□ 0.97
CHRD-203ENST00000356534 LUZP1Q86V48 1076 aa21.13■□□□□ 0.97
CHRD-203ENST00000356534 AHI1Q8N157 1196 aa21.13■□□□□ 0.97
CHRD-203ENST00000356534 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.13■□□□□ 0.97
CHRD-203ENST00000356534 CPA5Q8WXQ8 436 aa21.13■□□□□ 0.97
CHRD-203ENST00000356534 IQCDQ96DY2 449 aa21.13■□□□□ 0.97
CHRD-203ENST00000356534 EDEM3Q9BZQ6 932 aa21.13■□□□□ 0.97
CHRD-203ENST00000356534 KCNU1A8MYU2 1149 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 F5H5T6 163 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 CALB1P05937 261 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 MMP8P22894 467 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 SLC6A4P31645 630 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 CENPCQ03188 943 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 BYSLQ13895 437 aaKnown RBP21.12■□□□□ 0.97
CHRD-203ENST00000356534 STARD3Q14849 445 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 GEN1Q17RS7 908 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 USP39Q53GS9 565 aaKnown RBP21.12■□□□□ 0.97
CHRD-203ENST00000356534 MS4A13Q5J8X5 152 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 RABGAP1LQ5R372 815 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 NADSYN1Q6IA69 706 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 ANO7Q6IWH7 933 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 RFWD3Q6PCD5 774 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 MFN1Q8IWA4 741 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 GPR161Q8N6U8 529 aaKnown RBP21.12■□□□□ 0.97
CHRD-203ENST00000356534 PGAP3Q96FM1 320 aaPredicted RBP21.12■□□□□ 0.97
CHRD-203ENST00000356534 SPACA7Q96KW9 195 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 NPY6RQ99463 290 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 GABRG3Q99928 467 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 NUP58Q9BVL2 599 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 SEPT11Q9NVA2 429 aaKnown RBP21.12■□□□□ 0.97
CHRD-203ENST00000356534 ELOVL2Q9NXB9 296 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 BCCIPQ9P287 314 aaKnown RBP eCLIP21.12■□□□□ 0.97
CHRD-203ENST00000356534 GPR179Q6PRD1 2367 aa21.12■□□□□ 0.97
CHRD-203ENST00000356534 SYNJ2BP-COX16A0A087WUM0 186 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 TCRBV21S2A2A0A5A6 115 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 M0QYT0 321 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 HRO43593 1189 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 ADAM23O75077 832 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 TPM3P06753 285 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 PABPC1P11940 636 aaKnown RBP21.11■□□□□ 0.97
CHRD-203ENST00000356534 CHRNB2P17787 502 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 TACR2P21452 398 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 PXNP49023 591 aaPredicted RBP21.11■□□□□ 0.97
CHRD-203ENST00000356534 SULT1E1P49888 294 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 GSCP56915 257 aaPredicted RBP21.11■□□□□ 0.97
CHRD-203ENST00000356534 RNASE9P60153 205 aaKnown RBP21.11■□□□□ 0.97
CHRD-203ENST00000356534 PITX1P78337 314 aaPredicted RBP21.11■□□□□ 0.97
CHRD-203ENST00000356534 FANCCQ00597 558 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 NME3Q13232 169 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 CDH18Q13634 790 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 SLC25A52Q3SY17 297 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 FIGNQ5HY92 759 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 TMEM92Q6UXU6 159 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 CIPCQ9C0C6 399 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 NUCKS1Q9H1E3 243 aaKnown RBP21.11■□□□□ 0.97
CHRD-203ENST00000356534 COX16Q9P0S2 106 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 THAP10Q9P2Z0 257 aaPredicted RBP21.11■□□□□ 0.97
CHRD-203ENST00000356534 GGA2Q9UJY4 613 aa21.11■□□□□ 0.97
CHRD-203ENST00000356534 PI4KAP42356 2102 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms