RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 CLTCQ00610 1675 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 TOP3BO95985 862 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 CNPP09543 421 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 BMP3P12645 472 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 PGAM1P18669 254 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 NSUN2Q08J23 767 aaKnown RBP eCLIP8.2□□□□□ -1.1
HTT-201ENST00000355072 TRIP11Q15643 1979 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 SMYD4Q8IYR2 804 aaPredicted RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 LZTR1Q8N653 840 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 CD101Q93033 1021 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 PREX1Q8TCU6 1659 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 EPN2O95208 641 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 TCEAL5Q5H9L2 206 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 ESRP1Q6NXG1 681 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 BTN2A2Q8WVV5 523 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 ELMO2Q96JJ3 720 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 MAGEL2Q9UJ55 1249 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 DDX39AO00148 427 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 ORC5O43913 435 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 SERPINA1P01009 418 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 ITGA8P53708 1063 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 USP10Q14694 798 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 SPANXN3Q5MJ09 141 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 ZCCHC2Q9C0B9 1178 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 INTS2Q9H0H0 1204 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 LY9Q9HBG7 655 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 RAB6BQ9NRW1 208 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 THRAP3Q9Y2W1 955 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 MAGED1Q9Y5V3 778 aaPredicted RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 ERBB2P04626 1255 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 FOSL1P15407 271 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 PRKG1Q13976 671 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 MKL1Q969V6 931 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 HHATLQ9HCP6 504 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 ZNF318Q5VUA4 2279 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 NOS3P29474 1203 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 AIF1P55008 147 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 ELF3P78545 371 aaPredicted RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 SP4Q02446 784 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 C1QBPQ07021 282 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 TDGQ13569 410 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 SYTL3Q4VX76 610 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 RASAL3Q86YV0 1011 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 TBX22Q9Y458 520 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 NMT2O60551 498 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 SRPRAP08240 638 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 PAEPP09466 180 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 RORAP35398 523 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 NGRNQ9NPE2 291 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 COPZ2Q9P299 210 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 HMGXB4Q9UGU5 601 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 TLL2Q9Y6L7 1015 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 ASXL3Q9C0F0 2248 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 SEC24AO95486 1093 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 CCNG1P51959 295 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 CDH17Q12864 832 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 TBCELQ5QJ74 424 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 FAM173BQ6P4H8 233 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 RAB43Q86YS6 212 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 MAB21L3Q8N8X9 362 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 ATG16L2Q8NAA4 619 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 ATL1Q8WXF7 558 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 THUMPD3Q9BV44 507 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 APOL6Q9BWW8 343 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 NUP50Q9UKX7 468 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 ACOT9Q9Y305 439 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 SMNDC1O75940 238 aaKnown RBP eCLIP8.2□□□□□ -1.1
HTT-201ENST00000355072 KCNH1O95259 989 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 MAGEA2P43356 314 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 TOB2Q14106 344 aaPredicted RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 USP43Q70EL4 1123 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 SLC13A5Q86YT5 568 aaPredicted RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 TRPV3Q8NET8 790 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 CPNE2Q96FN4 548 aaPredicted RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 NMRAL1Q9HBL8 299 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 JPH1Q9HDC5 661 aaPredicted RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 PDPK1O15530 556 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 CLTBP09497 229 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 CACTIN-AS1Q8N1I8 211 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 DQX1Q8TE96 717 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 ERLEC1Q96DZ1 483 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 RMDN3Q96TC7 470 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 PAFAH2Q99487 392 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 YTHDF1Q9BYJ9 559 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 IL22Q9GZX6 179 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 RAD18Q9NS91 495 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 PADI4Q9UM07 663 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 CLOCKO15516 846 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 BBOX1O75936 387 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 MMP13P45452 471 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 MAPK8P45983 427 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 CHRNDQ07001 517 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 CHPFQ8IZ52 775 aa8.2□□□□□ -1.1
HTT-201ENST00000355072 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.2□□□□□ -1.1
HTT-201ENST00000355072 SAMD4AQ9UPU9 718 aaKnown RBP8.2□□□□□ -1.1
HTT-201ENST00000355072 RIPK2O43353 540 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 CHI3L1P36222 383 aaPredicted RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 TTLL4Q14679 1199 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 ERICH5Q6P6B1 374 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 OR2B2Q9GZK3 357 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms