RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 BLOC1S5Q8TDH9 187 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 ABHD8Q96I13 439 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 TAAR1Q96RJ0 339 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 RBAK-RBAKDNI3L0D1 243 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 CSPG5O95196 566 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 LYNP07948 512 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 MAPK1P28482 360 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 CRABP2P29373 138 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 ETFBP38117 255 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 HMGCS2P54868 508 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 ZNF268Q14587 947 aaPredicted RBP17.86■□□□□ 0.45
SPAST-202ENST00000345662 NFIL3Q16649 462 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 SYTL3Q4VX76 610 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 ANKS3Q6ZW76 656 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.86■□□□□ 0.45
SPAST-202ENST00000345662 ST13P5Q8NFI4 369 aaPredicted RBP17.86■□□□□ 0.45
SPAST-202ENST00000345662 KRT84Q9NSB2 600 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 DPP3Q9NY33 737 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 F8W810 466 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 ATXN8OSP0DMR3 200 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 GALK1P51570 392 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 SLC12A3P55017 1021 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 WASHC5Q12768 1159 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 FAM131BQ86XD5 332 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 HOMEZQ8IX15 550 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 GLIS3Q8NEA6 775 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 ENKURQ8TC29 256 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 ACSS3Q9H6R3 686 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 TMCC3Q9ULS5 477 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 ASB14A6NK59 587 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 POU1F1P28069 291 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 ALYREFQ86V81 257 aaKnown RBP17.86■□□□□ 0.45
SPAST-202ENST00000345662 SEPT12Q8IYM1 358 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 ALLCQ8N6M5 410 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 HTR3CQ8WXA8 447 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 TMEM176AQ96HP8 235 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 CLK4Q9HAZ1 481 aaKnown RBP17.86■□□□□ 0.45
SPAST-202ENST00000345662 ANAPC2Q9UJX6 822 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 BTBD3Q9Y2F9 522 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 RGSL1A5PLK6 1076 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 GAS2O43903 313 aaKnown RBP17.86■□□□□ 0.45
SPAST-202ENST00000345662 JCHAINP01591 159 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 SFRP1Q8N474 314 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 UNKQ9C0B0 810 aaKnown RBP17.86■□□□□ 0.45
SPAST-202ENST00000345662 TPP1O14773 563 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 RAD51BO15315 384 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 CHADO15335 359 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 NCAM2O15394 837 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 ZMPSTE24O75844 475 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 CPB1P15086 417 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 CCNA2P20248 432 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 PCSK1P29120 753 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 TALDO1P37837 337 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 HK2P52789 917 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 TOP3AQ13472 1001 aaPredicted RBP17.86■□□□□ 0.45
SPAST-202ENST00000345662 ACVR2BQ13705 512 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 EFCAB12Q6NXP0 572 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 ACOT1Q86TX2 421 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 C4orf19Q8IY42 314 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 MAGEE2Q8TD90 523 aaPredicted RBP17.86■□□□□ 0.45
SPAST-202ENST00000345662 MTMR9Q96QG7 549 aa17.86■□□□□ 0.45
SPAST-202ENST00000345662 PSMD12O00232 456 aaPredicted RBP17.85■□□□□ 0.45
SPAST-202ENST00000345662 FSCN2O14926 492 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 PDE9AO76083 593 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 GSTCDQ8NEC7 633 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 URGCPQ8TCY9 931 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 SPIRE2Q8WWL2 714 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 TMEM165Q9HC07 324 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 A0A0B4J269 797 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 TRIM38O00635 465 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 F9P00740 461 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 RPS6KA3P51812 740 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 CDH17Q12864 832 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 PWP1Q13610 501 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 IRF2BP2Q7Z5L9 587 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 UBASH3BQ8TF42 649 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 SEMA4DQ92854 862 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 FICDQ9BVA6 458 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 XPNPEP3Q9NQH7 507 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 FESP07332 822 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 PNPLA4P41247 253 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 TTC23Q5W5X9 447 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 TIGD7Q6NT04 549 aaPredicted RBP17.85■□□□□ 0.45
SPAST-202ENST00000345662 C19orf60Q96EN9 201 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 MBOAT7Q96N66 472 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 GPR63Q9BZJ6 419 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 FANCEQ9HB96 536 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 IL17RBQ9NRM6 502 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 LIMD1Q9UGP4 676 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 CEP170BQ9Y4F5 1589 aaPredicted RBP17.85■□□□□ 0.45
SPAST-202ENST00000345662 IPPQ9Y573 584 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 CCDC154A6NI56 674 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 NR2C2P49116 596 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 TWF1Q12792 350 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 LPIN1Q14693 890 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 RP9Q8TA86 221 aaKnown RBP17.85■□□□□ 0.45
SPAST-202ENST00000345662 ITFG1Q8TB96 612 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 CLEC4MQ9H2X3 399 aaPredicted RBP17.85■□□□□ 0.45
SPAST-202ENST00000345662 PACSIN3Q9UKS6 424 aa17.85■□□□□ 0.45
SPAST-202ENST00000345662 PRPF19Q9UMS4 504 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms