RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 ERFP50548 548 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 SKOR1P84550 965 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 SEL1L3Q68CR1 1132 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 SH3BP5LQ7L8J4 393 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 FAM9CQ8IZT9 166 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 ZNF333Q96JL9 665 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 SEMA4AQ9H3S1 761 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 APPL1Q9UKG1 709 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.17□□□□□ -0.3
DNMT1-201ENST00000340748 SLC9A3R1O14745 358 aaPredicted RBP13.17□□□□□ -0.3
DNMT1-201ENST00000340748 ZBTB39O15060 712 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 PSMD10O75832 226 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 TNFRSF8P28908 595 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 RPL21P46778 160 aaKnown RBP13.17□□□□□ -0.3
DNMT1-201ENST00000340748 FOXR2Q6PJQ5 311 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 KATNAL2Q8IYT4 538 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 SGF29Q96ES7 293 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 SRPK1Q96SB4 655 aaKnown RBP13.17□□□□□ -0.3
DNMT1-201ENST00000340748 SYTL2Q9HCH5 934 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 EVA1BQ9NVM1 165 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 TMEM150BA6NC51 233 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 FKBP9O95302 570 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 TCN1P20061 433 aaPredicted RBP13.17□□□□□ -0.3
DNMT1-201ENST00000340748 GLUD2P49448 558 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 DMC1Q14565 340 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 GRTP1Q5TC63 336 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 ZNF662Q6ZS27 426 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 FKBP9P1Q75LS8 142 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 CREG2Q8IUH2 290 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 ATXN2LQ8WWM7 1075 aaKnown RBP13.17□□□□□ -0.3
DNMT1-201ENST00000340748 TCF25Q9BQ70 676 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 ACOT9Q9Y305 439 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 TRAV19A0A0A6YYK7 116 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 MYO1GB0I1T2 1018 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 RARAP10276 462 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 MPP3Q13368 585 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 OLFML2BQ68BL8 750 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 CACUL1Q86Y37 369 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 TMEM120AQ9BXJ8 343 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 RXFP1Q9HBX9 757 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 RNF19AQ9NV58 838 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 VANGL2Q9ULK5 521 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 SOX13Q9UN79 622 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 DNAJC16Q9Y2G8 782 aa13.17□□□□□ -0.3
DNMT1-201ENST00000340748 PLA2G6O60733 806 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 MAP3K6O95382 1288 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 CPA3P15088 417 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 MAPK1P28482 360 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 DSG1Q02413 1049 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 NAB1Q13506 487 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 ITGA9Q13797 1035 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 CBWD6Q4V339 395 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 FNDC3BQ53EP0 1204 aaKnown RBP13.16□□□□□ -0.3
DNMT1-201ENST00000340748 CBWD3Q5JTY5 395 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 CBWD5Q5RIA9 395 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 SLC24A5Q71RS6 500 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 ADCK2Q7Z695 626 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 HORMAD1Q86X24 394 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 STX19Q8N4C7 294 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 MIR1-1HGQ9H1L0 117 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 NMRK1Q9NWW6 199 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 HAO1Q9UJM8 370 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 MAN1A2O60476 641 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 ACAT1P24752 427 aaKnown RBP13.16□□□□□ -0.3
DNMT1-201ENST00000340748 PSMA4P25789 261 aaKnown RBP13.16□□□□□ -0.3
DNMT1-201ENST00000340748 ATP6V1E1P36543 226 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 ZNF135P52742 658 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-201ENST00000340748 PRKAA2P54646 552 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 KIAA1324Q6UXG2 1013 aaKnown RBP13.16□□□□□ -0.3
DNMT1-201ENST00000340748 SLC22A9Q8IVM8 553 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 GALNT4Q8N4A0 578 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 THAP11Q96EK4 314 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 DTNBP1Q96EV8 351 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 SPATA17Q96L03 361 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 TRHDEQ9UKU6 1024 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 TREHO43280 583 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 KLRC4O43908 158 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 JCHAINP01591 159 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 SERPIND1P05546 499 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 PGAM1P18669 254 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 YWHAQP27348 245 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 PRR23CQ6ZRP0 262 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 SCUBE1Q8IWY4 988 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 CNDP1Q96KN2 507 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 SIKE1Q9BRV8 207 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 NFKBIZQ9BYH8 718 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 GANQ9H2C0 597 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 SELENONQ9NZV5 590 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 MAP10Q9P2G4 905 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 MRPS17Q9Y2R5 130 aaKnown RBP13.16□□□□□ -0.3
DNMT1-201ENST00000340748 SMIM35A0A1B0GVV1 85 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 FAM95CA0A1B0GW59 222 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 LACTBL1A8MY62 500 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 AQP5P55064 265 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 CYLC2Q14093 348 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-201ENST00000340748 CCDC153Q494R4 210 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 SPANXN3Q5MJ09 141 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 FBXO44Q9H4M3 255 aa13.16□□□□□ -0.3
DNMT1-201ENST00000340748 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms