RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 CFAP69A5D8W1 941 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 SLC38A8A6NNN8 435 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 GRXCR1A8MXD5 290 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 ATP9BO43861 1147 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 GJB5O95377 273 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 FNTAP49354 379 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 SLMAPQ14BN4 828 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 LRRC38Q5VT99 294 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 ALS2CLQ60I27 953 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 C16orf59Q7L2K0 433 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 LRRTM3Q86VH5 581 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 GSTCDQ8NEC7 633 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 SMG7Q92540 1137 aaKnown RBP12.11□□□□□ -0.47
C2orf88-201ENST00000340623 IFT43Q96FT9 208 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 TMLHEQ9NVH6 421 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 MYH10P35580 1976 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 STK25O00506 426 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 CA3P07451 260 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 RHOCP08134 193 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 GJA1P17302 382 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 OR1E1P30953 314 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 STX2P32856 288 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 ADRA1BP35368 520 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 STRADAQ7RTN6 431 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 ZBED8Q8IZ13 594 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 ZNF461Q8TAF7 563 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 FNIP1Q8TF40 1166 aa12.11□□□□□ -0.47
C2orf88-201ENST00000340623 OXCT2Q9BYC2 517 aaPredicted RBP12.11□□□□□ -0.47
C2orf88-201ENST00000340623 TARSL2A2RTX5 802 aaKnown RBP12.1□□□□□ -0.47
C2orf88-201ENST00000340623 CCNG2Q16589 344 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 TMC5Q6UXY8 1006 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 CCDC13Q8IYE1 715 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 SLC43A3Q8NBI5 491 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 DEPDC1BQ8WUY9 529 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 FCRL2Q96LA5 508 aaPredicted RBP12.1□□□□□ -0.47
C2orf88-201ENST00000340623 DDX23Q9BUQ8 820 aaKnown RBP12.1□□□□□ -0.47
C2orf88-201ENST00000340623 UBXN6Q9BZV1 441 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 LOXHD1Q8IVV2 1947 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 TRAV19A0A0A6YYK7 116 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 ARHGAP42A6NI28 874 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 CBX4O00257 560 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 RASGRF2O14827 1237 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 TCF4P15884 667 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 HOXC8P31273 242 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 AMPD2Q01433 879 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 OGDHQ02218 1023 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 DNAJB7Q7Z6W7 309 aaPredicted RBP12.1□□□□□ -0.47
C2orf88-201ENST00000340623 PCGF5Q86SE9 256 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 ANKMY2Q8IV38 441 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 TTC9BQ8N6N2 239 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 TSEN2Q8NCE0 465 aaKnown RBP12.1□□□□□ -0.47
C2orf88-201ENST00000340623 GABPB2Q8TAK5 448 aaPredicted RBP12.1□□□□□ -0.47
C2orf88-201ENST00000340623 ING5Q8WYH8 240 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 TMA16Q96EY4 203 aaKnown RBP12.1□□□□□ -0.47
C2orf88-201ENST00000340623 C9orf72Q96LT7 481 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 DCLK3Q9C098 648 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 MPP6Q9NZW5 540 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 VPS28Q9UK41 221 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 CNTN6Q9UQ52 1028 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 SNX10Q9Y5X0 201 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 CD48P09326 243 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 TAS1R1Q7RTX1 841 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 PYROXD2Q8N2H3 581 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 CCDC185Q8N715 623 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 IPMKQ8NFU5 416 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 CCDC110Q8TBZ0 833 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 MDM1Q8TC05 714 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 RMDN1Q96DB5 314 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 FAM161BQ96MY7 647 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 RNF157Q96PX1 679 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 SLC24A3Q9HC58 644 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 CYLDQ9NQC7 956 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 TLR9Q9NR96 1032 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 PAK5Q9P286 719 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 PLXNA1Q9UIW2 1896 aa12.1□□□□□ -0.47
C2orf88-201ENST00000340623 RAMP2O60895 175 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 PMPCBO75439 489 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 PAGE1O75459 146 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 DGKIO75912 1065 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 ERCC2P18074 760 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 ITGA8P53708 1063 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 VCPP55072 806 aaKnown RBP12.09□□□□□ -0.47
C2orf88-201ENST00000340623 ANKRD20A8PQ5CZ79 823 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 GPR158Q5T848 1215 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 FBXW10Q5XX13 1052 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 TXNRD3NBQ6F5E7 133 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 CES5AQ6NT32 575 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 OLFML1Q6UWY5 402 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 POLNQ7Z5Q5 900 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 TMEM173Q86WV6 379 aaPredicted RBP12.09□□□□□ -0.47
C2orf88-201ENST00000340623 GANCQ8TET4 914 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 HNRNPLLQ8WVV9 542 aaKnown RBP12.09□□□□□ -0.47
C2orf88-201ENST00000340623 KCNN1Q92952 543 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 TRAIPQ9BWF2 469 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 PCDH18Q9HCL0 1135 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 BFARQ9NZS9 450 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 CXXC1Q9P0U4 656 aaPredicted RBP12.09□□□□□ -0.47
C2orf88-201ENST00000340623 CCDC189A1A4V9 331 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 INHBAP08476 426 aa12.09□□□□□ -0.47
C2orf88-201ENST00000340623 STIP1P31948 543 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms