RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 PSMD10O75832 226 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 KIF20AO95235 890 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 NDUFA10O95299 355 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 GGPS1O95749 300 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 GNAI2P04899 355 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 MYCLP12524 364 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PPP3CBP16298 524 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PSMA3P25788 255 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 NFKBIAP25963 317 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 RBMS1P29558 406 aaKnown RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 CD52P31358 61 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 GGT5P36269 586 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 WNT7BP56706 349 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 RNASE9P60153 205 aaKnown RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 SIM1P81133 766 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 B4GALNT1Q00973 533 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 CTBSQ01459 385 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 CENPCQ03188 943 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 SEPT6Q14141 434 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 RFTN1Q14699 578 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 NAA25Q14CX7 972 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 ZXDCQ2QGD7 858 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PLEKHG6Q3KR16 790 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 EFHC2Q5JST6 749 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 DCAF10Q5QP82 559 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 TANGO2Q6ICL3 276 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 BHLHB9Q6PI77 547 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 TXNDC11Q6PKC3 985 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 CHSY3Q70JA7 882 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PDZD4Q76G19 769 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 CHST9Q7L1S5 443 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 ZBTB33Q86T24 672 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 DMRTC2Q8IXT2 367 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 DCLK2Q8N568 766 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 DTX3Q8N9I9 347 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 FSIP1Q8NA03 581 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 MCPH1Q8NEM0 835 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 FLCNQ8NFG4 579 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PROKR1Q8TCW9 393 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 ITLN2Q8WWU7 325 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 SCMH1Q96GD3 660 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 LRGUKQ96M69 825 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 SYT3Q9BQG1 590 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 RBM4Q9BWF3 364 aaKnown RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 C1QTNF7Q9BXJ2 289 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 FOXQ1Q9C009 403 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 LHX5Q9H2C1 402 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PRDM16Q9HAZ2 1276 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 OLA1Q9NTK5 396 aaKnown RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 COL20A1Q9P218 1284 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 YIPF1Q9Y548 306 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 ZNF292O60281 2723 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 ACACBO00763 2458 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 SPG11Q96JI7 2443 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 OR14I1A6ND48 311 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 EIF3CLB5ME19 914 aaKnown RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 EIF3DO15371 548 aaKnown RBP eCLIP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 TADA3O75528 432 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 ABL1P00519 1130 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 CRHP06850 196 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PGK2P07205 417 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 CELA2BP08218 269 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PIM1P11309 404 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PRPHP41219 470 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 FASLGP48023 281 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 ZNF135P52742 658 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 GSCP56915 257 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 GSDMDP57764 484 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 NLRP5P59047 1200 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PFN3P60673 137 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 COPS2P61201 443 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 SLC20A2Q08357 652 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 LY6DQ14210 128 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 IHHQ14623 411 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 NFKBIBQ15653 356 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 HLA-BQ31612 363 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 KRT79Q5XKE5 535 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 C11orf88Q6PI97 169 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 SCIMPQ6UWF3 145 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 DNAJB7Q7Z6W7 309 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 RALYLQ86SE5 291 aaKnown RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 ANKRD13BQ86YJ7 626 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 RFLNBQ8N5W9 214 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 TMEM86BQ8N661 226 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 ARL10Q8N8L6 244 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PROX1Q92786 737 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 CEP95Q96GE4 821 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PDLIM2Q96JY6 352 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 RMDN3Q96TC7 470 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 EIF3CQ99613 913 aaKnown RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 STRA6Q9BX79 667 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PUS3Q9BZE2 481 aaKnown RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 ZMYND12Q9H0C1 365 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 FOXP1Q9H334 677 aaPredicted RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 MINDY3Q9H8M7 445 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 JMJD4Q9H9V9 463 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 MRM3Q9HC36 420 aaKnown RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 TM9SF3Q9HD45 589 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 A4GALTQ9NPC4 353 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms