RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 AMHP03971 560 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 TSPAN8P19075 237 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 TMEM176AQ96HP8 235 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 PRRG4Q9BZD6 226 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 ANAPC2Q9UJX6 822 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 CDHR2Q9BYE9 1310 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 A0A1W2PQC6 194 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 TRIM66O15016 1216 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 USP12O75317 370 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 HIST1H2ABP04908 130 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 MGAT1P26572 445 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 AQP5P55064 265 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 HIST3H2AQ7L7L0 130 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 HIST1H2ACQ93077 130 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 TMEM79Q9BSE2 394 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 RIBC2Q9H4K1 309 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 CISHQ9NSE2 258 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 RBM7Q9Y580 266 aaKnown RBP10.81□□□□□ -0.68
CLN8-201ENST00000331222 SUPT20HL2P0C7V6 817 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 NPTX2P47972 431 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 NDST1P52848 882 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 TMEM26Q6ZUK4 368 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 PROSER1Q86XN7 944 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 MOSPD2Q8NHP6 518 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 SLC20A1Q8WUM9 679 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 XPO6Q96QU8 1125 aaKnown RBP10.8□□□□□ -0.68
CLN8-201ENST00000331222 SEMA6AQ9H2E6 1030 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 LIMD1Q9UGP4 676 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 POLLQ9UGP5 575 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 KLHL3Q9UH77 587 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 SNX6Q9UNH7 406 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 IL1BP01584 269 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 ADORA2AP29274 412 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 ZNF280DQ6N043 979 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 ST13P5Q8NFI4 369 aaPredicted RBP10.8□□□□□ -0.68
CLN8-201ENST00000331222 TATDN2Q93075 761 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 ERP44Q9BS26 406 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 ATP13A1Q9HD20 1204 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 OSGEPQ9NPF4 335 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 XPNPEP3Q9NQH7 507 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 CCDC167Q9P0B6 97 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 SEPT3Q9UH03 358 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 CACNA1FO60840 1977 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 GSAPA4D1B5 854 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 FAM220BPB1ANY3 271 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 TCEA3O75764 348 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 CRADDP78560 199 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 PFKPQ01813 784 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 NR1I3Q14994 352 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 NEDD8Q15843 81 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 RASAL3Q86YV0 1011 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 CYP4Z2PQ8N1L4 340 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 CASKIN2Q8WXE0 1202 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 EXOC2Q96KP1 924 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 EPB41L4AQ9HCS5 686 aaPredicted RBP10.8□□□□□ -0.68
CLN8-201ENST00000331222 GLI2P10070 1586 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.8□□□□□ -0.68
CLN8-201ENST00000331222 PPP1R37O75864 691 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 CTNNB1P35222 781 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 SRP54P61011 504 aaKnown RBP10.8□□□□□ -0.68
CLN8-201ENST00000331222 ARMCX4Q5H9R4 360 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 DPY30Q9C005 99 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 GRIP2Q9C0E4 1043 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 CCSER1Q9C0I3 900 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 MID1IP1Q9NPA3 183 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 SLC27A5Q9Y2P5 690 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 CNTNAP5Q8WYK1 1306 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 DDX3XO00571 662 aaKnown RBP eCLIP10.8□□□□□ -0.685e-9■■■■□ 23.9
CLN8-201ENST00000331222 AMPD1P23109 780 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 HSD17B3P37058 310 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 ORC2Q13416 577 aaPredicted RBP10.8□□□□□ -0.68
CLN8-201ENST00000331222 RSBN1Q5VWQ0 802 aaPredicted RBP10.8□□□□□ -0.68
CLN8-201ENST00000331222 ZC3H7AQ8IWR0 971 aaKnown RBP10.8□□□□□ -0.68
CLN8-201ENST00000331222 SCAIQ8N9R8 606 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 PCSK9Q8NBP7 692 aaKnown RBP10.8□□□□□ -0.68
CLN8-201ENST00000331222 NEK7Q8TDX7 302 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 TP53INP1Q96A56 240 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 SLC9A7Q96T83 725 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 COG5Q9UP83 839 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 VPS9D1Q9Y2B5 631 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 BTN3A1O00481 513 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 KIAA0391O15091 583 aaKnown RBP10.8□□□□□ -0.68
CLN8-201ENST00000331222 NTRK1P04629 796 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 RPN2P04844 631 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 GYPCP04921 128 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 TALDO1P37837 337 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 BACE1P56817 501 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 IL2P60568 153 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 KCNMA1Q12791 1236 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 ARMC4Q5T2S8 1044 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 REXO1L1PQ8IX06 675 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 ADSSL1Q8N142 457 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 JSRP1Q96MG2 331 aaPredicted RBP10.8□□□□□ -0.68
CLN8-201ENST00000331222 UBE2OQ9C0C9 1292 aaKnown RBP10.8□□□□□ -0.68
CLN8-201ENST00000331222 TNKS2Q9H2K2 1166 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 KCNF1Q9H3M0 494 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 LRRC4BQ9NT99 713 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 PCDHB9Q9Y5E1 797 aa10.8□□□□□ -0.68
CLN8-201ENST00000331222 TTC37Q6PGP7 1564 aa10.79□□□□□ -0.68
CLN8-201ENST00000331222 TNS3Q68CZ2 1445 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms