RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 RRN3Q9NYV6 651 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 OGDHLQ9ULD0 1010 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 SIK3Q9Y2K2 1263 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 DGKBQ9Y6T7 804 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 NRKQ7Z2Y5 1582 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 F5H5T6 163 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 PTSQ03393 145 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 ERMARDQ5T6L9 678 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 PRR23CQ6ZRP0 262 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 TTC7BQ86TV6 843 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 HTRA1Q92743 480 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 CAVIN3Q969G5 261 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 SPACA7Q96KW9 195 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 DCLK3Q9C098 648 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 NDOR1Q9UHB4 597 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 FLT1P17948 1338 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 O00370 1275 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 CCNT2O60583 730 aaKnown RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 TRAF3Q13114 568 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 EPHA7Q15375 998 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 MTFR1Q15390 333 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 FGD3Q5JSP0 725 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 LDLRAP1Q5SW96 308 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 CYP4Z1Q86W10 505 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 DHRSXQ8N5I4 330 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 TSPAN14Q8NG11 270 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 OXNAD1Q96HP4 312 aaPredicted RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 PPCSQ9HAB8 311 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 GPRC5CQ9NQ84 441 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 TRNAU1APQ9NX07 287 aaKnown RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 CBX4O00257 560 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 GLRA3O75311 464 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 PCDH8O95206 1070 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 VTNP04004 478 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 PROCP04070 461 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 ZNF543Q08ER8 600 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 FAAP100Q0VG06 881 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 GNASQ5JWF2 1037 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 TCF7L2Q9NQB0 619 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.08□□□□□ -1.12
CIITA-201ENST00000324288 VPS28Q9UK41 221 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 KDM6BO15054 1643 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 CDK12Q9NYV4 1490 aaPredicted RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 C2orf81A6NN90 581 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 CHURC1-FNTBB4DL54 471 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 EXTL3O43909 919 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 FKBP6O75344 327 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 GTF2E2P29084 291 aaKnown RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 STX4Q12846 297 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 IQCF2Q8IXL9 164 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 CYP4Z2PQ8N1L4 340 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 RIBC1Q8N443 379 aaPredicted RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 FOXP3Q9BZS1 431 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 NIF3L1Q9GZT8 377 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 THAP1Q9NVV9 213 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 MCUBQ9NWR8 336 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 ARHGAP31Q2M1Z3 1444 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 TSPAN4O14817 238 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 FASP25445 335 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 PCSK1P29120 753 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 NPEPPSP55786 919 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 CENPCQ03188 943 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 XRCC4Q13426 336 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 SNAPC2Q13487 334 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 PKN2Q16513 984 aaKnown RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 MACC1Q6ZN28 852 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 PCDH20Q8N6Y1 951 aaKnown RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 HNRNPLLQ8WVV9 542 aaKnown RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 SENP6Q9GZR1 1112 aaPredicted RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 CYP39A1Q9NYL5 469 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 BIRC5O15392 142 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 TMEM253P0C7T8 217 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 HALP42357 657 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 ALDH7A1P49419 539 aaKnown RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 RALGDSQ12967 914 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 DCP1BQ8IZD4 617 aaKnown RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 IPCEF1Q8WWN9 437 aaPredicted RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 KCNQ2O43526 872 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 CD4P01730 458 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 CYP4B1P13584 511 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 GSTA3Q16772 222 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 SPPL2AQ8TCT8 520 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 COPS4Q9BT78 406 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 ELL3Q9HB65 397 aaPredicted RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 TMEM8AQ9HCN3 771 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 MRASO14807 208 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 MZT2BQ6NZ67 158 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 FAR1Q8WVX9 515 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 C1orf50Q9BV19 199 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 CROTQ9UKG9 612 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 COG5Q9UP83 839 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 ARHGEF40Q8TER5 1519 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 SCGNO76038 276 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 ARF4P18085 180 aaPredicted RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 OXCT1P55809 520 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 HSF2Q03933 536 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 POU6F1Q14863 301 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 NDUFAF6Q330K2 333 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 POM121L1PQ3SYA9 428 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 MARK2Q7KZI7 788 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms