RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ZC3H7AQ8IWR0 971 aaKnown RBP12.92□□□□□ -0.34
USP38-201ENST00000307017 CEP44Q9C0F1 390 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 ATG10Q9H0Y0 220 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 ZFP14Q9HCL3 533 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 TMLHEQ9NVH6 421 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 TAS2R14Q9NYV8 317 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 VTI1BQ9UEU0 232 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 ZNF112Q9UJU3 913 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 PUDPQ08623 228 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 GNASQ5JWF2 1037 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 ULK2Q8IYT8 1036 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 NIF3L1Q9GZT8 377 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 MCUBQ9NWR8 336 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 DNPEPQ9ULA0 475 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 C2CD2Q9Y426 696 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 F5H5T6 163 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 PIRTP0C851 137 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 CYP2C8P10632 490 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 EFNA5P52803 228 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 NRG1Q02297 640 aaPredicted RBP12.92□□□□□ -0.34
USP38-201ENST00000307017 UGP2Q16851 508 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 GPR107Q5VW38 600 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 MTMR8Q96EF0 704 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 MAP3K14Q99558 947 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 ARHGAP20Q9P2F6 1191 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 EGFL7Q9UHF1 273 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 U3KQV3 271 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 MYO5CQ9NQX4 1742 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 SCAMP1O15126 338 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 PSMD3O43242 534 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 MICAL2O94851 1124 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 SULT1C3Q6IMI6 304 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 POMZP3Q6PJE2 187 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 AMIGO2Q86SJ2 522 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 DENND6AQ8IWF6 608 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 GPR152Q8TDT2 470 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 HPS1Q92902 700 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 RMND5AQ9H871 391 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 ELL3Q9HB65 397 aaPredicted RBP12.92□□□□□ -0.34
USP38-201ENST00000307017 KHDRBS3O75525 346 aaKnown RBP12.92□□□□□ -0.34
USP38-201ENST00000307017 DGAT1O75907 488 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 NCK1P16333 377 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 CRATP43155 626 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 POLD2P49005 469 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 CYP4F8P98187 520 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 PTSQ03393 145 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 NR1D2Q14995 579 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 XKR3Q5GH77 459 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 ANKS6Q68DC2 871 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 RTL3Q8N8U3 475 aaKnown RBP12.92□□□□□ -0.34
USP38-201ENST00000307017 VPS37AQ8NEZ2 397 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 PRRG3Q9BZD7 231 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 COMMD8Q9NX08 183 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 PMF1-BGLAPU3KQ54 211 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 EFCAB10A6NFE3 127 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 TSPAN19P0C672 248 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 ATP4AP20648 1035 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 TAF1CQ15572 869 aaPredicted RBP12.92□□□□□ -0.34
USP38-201ENST00000307017 IL27RAQ6UWB1 636 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 HPS6Q86YV9 775 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 HIPK1Q86Z02 1210 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 HTRA1Q92743 480 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 PURBQ96QR8 312 aaKnown RBP12.92□□□□□ -0.34
USP38-201ENST00000307017 CLOCKO15516 846 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 GLP2RO95838 553 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 IDH2P48735 452 aaKnown RBP12.91□□□□□ -0.34
USP38-201ENST00000307017 STX5Q13190 355 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 GLIS3Q8NEA6 775 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 ZBTB45Q96K62 511 aaPredicted RBP12.91□□□□□ -0.34
USP38-201ENST00000307017 ACTR8Q9H981 624 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 PCDHB8Q9UN66 801 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 ARHGEF40Q8TER5 1519 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 CDC42BPGQ6DT37 1551 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 AFF2P51816 1311 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 KRT36O76013 467 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 PTPN4P29074 926 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 R3HDM1Q15032 1099 aaKnown RBP12.91□□□□□ -0.34
USP38-201ENST00000307017 ZNF70Q9UC06 446 aaPredicted RBP12.91□□□□□ -0.34
USP38-201ENST00000307017 ATP10AO60312 1499 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 GAKO14976 1311 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 SSU72P8A0A1W2PR75 194 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 SMAD9O15198 467 aaKnown RBP12.91□□□□□ -0.34
USP38-201ENST00000307017 STAG3L1P0CL83 205 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 DHFR2Q86XF0 187 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 PNPT1Q8TCS8 783 aaKnown RBP12.91□□□□□ -0.34
USP38-201ENST00000307017 AGAP11Q8TF27 550 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 MYOCQ99972 504 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 C12orf65Q9H3J6 166 aaKnown RBP12.91□□□□□ -0.34
USP38-201ENST00000307017 PCDH12Q9NPG4 1184 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 BTN3A1O00481 513 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 AHCYL1O43865 530 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 EIF2S1P05198 315 aaKnown RBP12.91□□□□□ -0.34
USP38-201ENST00000307017 PEX5P50542 639 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 DGKZQ13574 1117 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 EID3Q8N140 333 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 ZNF671Q8TAW3 534 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 OSMRQ99650 979 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 DPY30Q9C005 99 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 PDGFDQ9GZP0 370 aaPredicted RBP12.91□□□□□ -0.34
USP38-201ENST00000307017 CLPBQ9H078 707 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms