RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 CLSTN3Q9BQT9 956 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 OSBPL2Q9H1P3 480 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 SEMA4AQ9H3S1 761 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 CLIC5Q9NZA1 410 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 SPG21Q9NZD8 308 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 SHOC2Q9UQ13 582 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 MFHAS1Q9Y4C4 1052 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 NUDT17P0C025 328 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 RPL17P18621 184 aaKnown RBP16.06■□□□□ 0.16
LSM6-201ENST00000296581 RBL1P28749 1068 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 GLUD2P49448 558 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 PPP2R5DQ14738 602 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 SLC45A4Q5BKX6 768 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 KIAA1841Q6NSI8 718 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 TRMT10CQ7L0Y3 403 aaKnown RBP16.06■□□□□ 0.16
LSM6-201ENST00000296581 GPR152Q8TDT2 470 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 SERPINB11Q96P15 392 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 SFMBT1Q9UHJ3 866 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 HACD1B0YJ81 288 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 ATF6P18850 670 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 TPI1P60174 286 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 C11orf91Q3C1V1 193 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 B4GALNT4Q76KP1 1039 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 OTOP2Q7RTS6 562 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 DDX53Q86TM3 631 aaKnown RBP16.06■□□□□ 0.16
LSM6-201ENST00000296581 PRCCQ92733 491 aaPredicted RBP16.06■□□□□ 0.16
LSM6-201ENST00000296581 RNF34Q969K3 372 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 FBXO32Q969P5 355 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 HAPLN3Q96S86 360 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 HSFX1Q9UBD0 423 aa16.06■□□□□ 0.16
LSM6-201ENST00000296581 AFF4Q9UHB7 1163 aaKnown RBP16.06■□□□□ 0.16
LSM6-201ENST00000296581 KCNN4O15554 427 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 MFSD11O43934 449 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 ABLIM3O94929 683 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 MAP3K6O95382 1288 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 ERCC2P18074 760 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 CALRP27797 417 aaKnown RBP16.05■□□□□ 0.16
LSM6-201ENST00000296581 HNRNPH1P31943 449 aaKnown RBP16.05■□□□□ 0.16
LSM6-201ENST00000296581 CEP128Q6ZU80 1094 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 HOOK3Q86VS8 718 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 CCDC25Q86WR0 208 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 HOMEZQ8IX15 550 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 PPIL6Q8IXY8 311 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 CPT1BQ92523 772 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 YME1L1Q96TA2 773 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 EPAS1Q99814 870 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 TTLL2Q9BWV7 592 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 PCDH10Q9P2E7 1040 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 OR12D3Q9UGF7 316 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 SLC38A8A6NNN8 435 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 GOLGA8KD6RF30 607 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 SMAPO00193 183 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 RIPK2O43353 540 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 RNF40O75150 1001 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 ZDHHC11BP0C7U3 371 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 CCR1P32246 355 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 TUFMP49411 452 aaKnown RBP16.05■□□□□ 0.16
LSM6-201ENST00000296581 NRLP54845 237 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 EIF3BP55884 814 aaKnown RBP16.05■□□□□ 0.16
LSM6-201ENST00000296581 ZNF844Q08AG5 666 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 TAF10Q12962 218 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 PPIGQ13427 754 aaKnown RBP eCLIP16.05■□□□□ 0.16
LSM6-201ENST00000296581 NAT8LQ8N9F0 302 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 PWWP2AQ96N64 755 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 TACO1Q9BSH4 297 aaKnown RBP16.05■□□□□ 0.16
LSM6-201ENST00000296581 CDC42EP4Q9H3Q1 356 aaKnown RBP16.05■□□□□ 0.16
LSM6-201ENST00000296581 TLR8Q9NR97 1041 aaKnown RBP16.05■□□□□ 0.16
LSM6-201ENST00000296581 PAK5Q9P286 719 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 NUDT5Q9UKK9 219 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 RAD54BQ9Y620 910 aa16.05■□□□□ 0.16
LSM6-201ENST00000296581 KCNU1A8MYU2 1149 aa16.04■□□□□ 0.16
LSM6-201ENST00000296581 C2CD2LO14523 706 aa16.04■□□□□ 0.16
LSM6-201ENST00000296581 MSI1O43347 362 aaKnown RBP16.04■□□□□ 0.16
LSM6-201ENST00000296581 EN2P19622 333 aaPredicted RBP16.04■□□□□ 0.16
LSM6-201ENST00000296581 HTRA4P83105 476 aaPredicted RBP16.04■□□□□ 0.16
LSM6-201ENST00000296581 TPGS2Q68CL5 300 aa16.04■□□□□ 0.16
LSM6-201ENST00000296581 DENND2CQ68D51 928 aa16.04■□□□□ 0.16
LSM6-201ENST00000296581 OR2W6PQ8NHA6 318 aa16.04■□□□□ 0.16
LSM6-201ENST00000296581 ZNF461Q8TAF7 563 aa16.04■□□□□ 0.16
LSM6-201ENST00000296581 SLC39A13Q96H72 371 aa16.04■□□□□ 0.16
LSM6-201ENST00000296581 OLA1Q9NTK5 396 aaKnown RBP16.04■□□□□ 0.16
LSM6-201ENST00000296581 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.04■□□□□ 0.16
LSM6-201ENST00000296581 TLR6Q9Y2C9 796 aa16.04■□□□□ 0.16
LSM6-201ENST00000296581 SNX10Q9Y5X0 201 aa16.04■□□□□ 0.16
LSM6-201ENST00000296581 LRIG2O94898 1065 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 FGBP02675 491 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 HTR7P34969 479 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 PPM1AP35813 382 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 SLC29A2Q14542 456 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 CEP85LQ5SZL2 805 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 RASIP1Q5U651 963 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 C4orf22Q6V702 233 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 GPR65Q8IYL9 337 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 ARL8AQ96BM9 186 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 PHACTR1Q9C0D0 580 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 FAM107BQ9H098 131 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 NEU3Q9UQ49 428 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 PAGE1O75459 146 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 GCATO75600 419 aa16.03■□□□□ 0.16
LSM6-201ENST00000296581 BIRC2Q13490 618 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms