RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SAMD15Q9P1V8 674 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 OR12D3Q9UGF7 316 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 UGT1A9O60656 530 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 PSMB4P28070 264 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 ABI1Q8IZP0 508 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 DBF4BQ8NFT6 615 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 ACSS3Q9H6R3 686 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 UGT1A7Q9HAW7 530 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 UGT1A10Q9HAW8 530 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 UGT1A8Q9HAW9 530 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 TBC1D13Q9NVG8 400 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 TEX264Q9Y6I9 313 aa18.51■□□□□ 0.55
CAPN1-201ENST00000279247 CXorf49A8MYA2 514 aaPredicted RBP18.5■□□□□ 0.55
CAPN1-201ENST00000279247 C9IYK1 514 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 E7ESA3 106 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 TADA2AO75478 443 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 INHBAP08476 426 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 NR2C2P49116 596 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 SLC5A3P53794 718 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 WDR4P57081 412 aaKnown RBP18.5■□□□□ 0.55
CAPN1-201ENST00000279247 NOMO2Q5JPE7 1267 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 DCLRE1AQ6PJP8 1040 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 NPWQ8N729 165 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 UBP1Q9NZI7 540 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 SLC17A6Q9P2U8 582 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 ZMYND8Q9ULU4 1186 aaPredicted RBP18.5■□□□□ 0.55
CAPN1-201ENST00000279247 GOLGA6L7A0A1B0GV03 622 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 BMPR2Q13873 1038 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 SEPT7Q16181 437 aaKnown RBP18.5■□□□□ 0.55
CAPN1-201ENST00000279247 TRMT10BQ6PF06 316 aaKnown RBP18.5■□□□□ 0.55
CAPN1-201ENST00000279247 CES3Q6UWW8 571 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 TTC9BQ8N6N2 239 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 PXYLP1Q8TE99 480 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 USP33Q8TEY7 942 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 CYTH2Q99418 400 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 CFHR5Q9BXR6 569 aa18.5■□□□□ 0.55
CAPN1-201ENST00000279247 KLHL8Q9P2G9 620 aaPredicted RBP18.5■□□□□ 0.55
CAPN1-201ENST00000279247 GBP2P32456 591 aaPredicted RBP18.49■□□□□ 0.55
CAPN1-201ENST00000279247 FAAP100Q0VG06 881 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 DNAJC3Q13217 504 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 SLC1A5Q15758 541 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 RAB41Q5JT25 222 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 FAM171BQ6P995 826 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 BHLHA9Q7RTU4 235 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 DQX1Q8TE96 717 aaKnown RBP18.49■□□□□ 0.55
CAPN1-201ENST00000279247 PQBP1O60828 265 aaKnown RBP18.49■□□□□ 0.55
CAPN1-201ENST00000279247 CABYRO75952 493 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 F7P08709 466 aaPredicted RBP18.49■□□□□ 0.55
CAPN1-201ENST00000279247 SPRED3Q2MJR0 410 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 KLHL38Q2WGJ6 581 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 ARL13BQ3SXY8 428 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 MICALCLQ6ZW33 695 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 MICALL1Q8N3F8 863 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 ATAD1Q8NBU5 361 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 PKNOX2Q96KN3 472 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 SUSD3Q96L08 255 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 APOL2Q9BQE5 337 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 RNF208Q9H0X6 261 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 FBXW11Q9UKB1 542 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 LRIG2O94898 1065 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 FOXN2P32314 431 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 BTBD8Q5XKL5 378 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 SCLYQ96I15 445 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 RGS18Q9NS28 235 aa18.49■□□□□ 0.55
CAPN1-201ENST00000279247 THSD7BQ9C0I4 1608 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 CCDC78A2IDD5 438 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 M0QZQ0 153 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 RIBC1Q8N443 379 aaPredicted RBP18.48■□□□□ 0.55
CAPN1-201ENST00000279247 CCDC197Q8NCU1 140 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 URGCPQ8TCY9 931 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 RTP4Q96DX8 246 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 OLFM3Q96PB7 478 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.48■□□□□ 0.55
CAPN1-201ENST00000279247 SLCO1B3Q9NPD5 702 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.48■□□□□ 0.55
CAPN1-201ENST00000279247 A0A0A0MRY4 1105 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 WDR27A2RRH5 827 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 GCATO75600 419 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 DGKIO75912 1065 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 UPP2O95045 317 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 RPLP2P05387 115 aaKnown RBP18.48■□□□□ 0.55
CAPN1-201ENST00000279247 NKX3-2P78367 333 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 HHATQ5VTY9 493 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 FAM171A1Q5VUB5 890 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 TRAF7Q6Q0C0 670 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 CCDC121Q6ZUS5 278 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 LRRC8DQ7L1W4 858 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 ZNF567Q8N184 647 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 SLAIN1Q8ND83 568 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 DCAKDQ8WVC6 231 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 SPATA13Q96N96 652 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 SLC24A2Q9UI40 661 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 SLC27A5Q9Y2P5 690 aa18.48■□□□□ 0.55
CAPN1-201ENST00000279247 MOXD2PA6NHM9 499 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 MT-ND3P03897 115 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 SKIP12755 728 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 CORO7P57737 925 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 XRCC4Q13426 336 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 DPYSQ14117 519 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 PDK1Q15118 436 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms