RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 OCRLQ01968 901 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 LAMTOR4Q0VGL1 99 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 LUZP2Q86TE4 346 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 SNX31Q8N9S9 440 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 METTL21AQ8WXB1 218 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 EXT2Q93063 718 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 KCNF1Q9H3M0 494 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.03□□□□□ -1.12
USP3-201ENST00000268049 MAN1B1Q9UKM7 699 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 TRIM33Q9UPN9 1127 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 SNX24Q9Y343 169 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 AP4S1Q9Y587 144 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 GRXCR2A6NFK2 248 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 URADA6NGE7 173 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 LRRC53A6NM62 1247 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 H3BUI4 141 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 GFPT2O94808 682 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 EOMESO95936 686 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 HOXB8P17481 243 aaPredicted RBP8.03□□□□□ -1.12
USP3-201ENST00000268049 GABRR2P28476 465 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 GRIN1Q05586 938 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 PDK1Q15118 436 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 PLPPR4Q7Z2D5 763 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 PHC3Q8NDX5 983 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 SPPL2BQ8TCT7 592 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 WFIKKN2Q8TEU8 576 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 PRCCQ92733 491 aaPredicted RBP8.03□□□□□ -1.12
USP3-201ENST00000268049 MTBPQ96DY7 904 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 BBS2Q9BXC9 721 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 SFXN1Q9H9B4 322 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 SLC2A4RGQ9NR83 387 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 HSPBP1Q9NZL4 362 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 FIS1Q9Y3D6 152 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 PCDHB2Q9Y5E7 798 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 COL1A1P02452 1464 aaPredicted RBP8.03□□□□□ -1.12
USP3-201ENST00000268049 TEX33O43247 280 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 LCA5LO95447 670 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 JMJD7P0C870 316 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 ZCCHC18P0CG32 403 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 SERPINA4P29622 427 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 MAP3K10Q02779 954 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 FMR1Q06787 632 aaKnown RBP eCLIP8.03□□□□□ -1.12
USP3-201ENST00000268049 PDGFRLQ15198 375 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 ZC3H12BQ5HYM0 836 aaKnown RBP8.03□□□□□ -1.12
USP3-201ENST00000268049 USP45Q70EL2 814 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 TTC29Q8NA56 475 aaPredicted RBP8.03□□□□□ -1.12
USP3-201ENST00000268049 HCAR2Q8TDS4 363 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 PRRG4Q9BZD6 226 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 SLC13A1Q9BZW2 595 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 ADNPQ9H2P0 1102 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 ASB7Q9H672 318 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 ARMC7Q9H6L4 198 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 NSMCE4AQ9NXX6 385 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 ADA2Q9NZK5 511 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 HCN3Q9P1Z3 774 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 RGPD1P0DJD0 1748 aa8.03□□□□□ -1.12
USP3-201ENST00000268049 CLUHO75153 1309 aa8.02□□□□□ -1.12
USP3-201ENST00000268049 ANXA9O76027 345 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 FGGP02679 453 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 S100A9P06702 114 aaKnown RBP8.02□□□□□ -1.13
USP3-201ENST00000268049 CYP2C18P33260 490 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 NRIP1P48552 1158 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 FXR2P51116 673 aaKnown RBP eCLIP8.02□□□□□ -1.13
USP3-201ENST00000268049 PDAP1Q13442 181 aaKnown RBP8.02□□□□□ -1.13
USP3-201ENST00000268049 ZRANB3Q5FWF4 1079 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 LRIG3Q6UXM1 1119 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 C2orf15Q8WU43 125 aaKnown RBP8.02□□□□□ -1.13
USP3-201ENST00000268049 BBS4Q96RK4 519 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 SMPD4Q9NXE4 827 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 A6NCN8 305 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 KRT37O76014 449 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 CCNDBP1O95273 360 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 COL6A1P12109 1028 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 AGXTP21549 392 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 HOXC12P31275 282 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 ERFP50548 548 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 SEC24CP53992 1094 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 COPS2P61201 443 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 ROR2Q01974 943 aaKnown RBP8.02□□□□□ -1.13
USP3-201ENST00000268049 UBE3AQ05086 875 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 TRIP13Q15645 432 aaPredicted RBP8.02□□□□□ -1.13
USP3-201ENST00000268049 MDH1BQ5I0G3 518 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 ACAD11Q709F0 780 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 COLGALT2Q8IYK4 626 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 PDIK1LQ8N165 341 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 TMEM145Q8NBT3 493 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 KREMEN2Q8NCW0 462 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 C3orf20Q8ND61 904 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 PYROXD1Q8WU10 500 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 BADQ92934 168 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 FBXL5Q9UKA1 691 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 ST3GAL5Q9UNP4 418 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 COL18A1P39060 1754 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 GRID2IPA4D2P6 1211 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 CTDNEP1O95476 244 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 VDRP11473 427 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 NQO1P15559 274 aaKnown RBP8.02□□□□□ -1.13
USP3-201ENST00000268049 CHN1P15882 459 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 GEMP55040 296 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 SHROOM1Q2M3G4 852 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms