RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 WDR41Q9HAD4 459 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 HPS4Q9NQG7 708 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 COMMD9Q9P000 198 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 ANAPC2Q9UJX6 822 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 VPS9D1Q9Y2B5 631 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 TMED5Q9Y3A6 229 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 FAM220BPB1ANY3 271 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 SERPINA1P01009 418 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 MSH3P20585 1137 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 RPL21P46778 160 aaKnown RBP13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 TFDP3Q5H9I0 405 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 TUBGCP5Q96RT8 1024 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 SMAD5Q99717 465 aaKnown RBP13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 KCTD10Q9H3F6 313 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 NINJ2Q9NZG7 142 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 NUDT5Q9UKK9 219 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 HPSEQ9Y251 543 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 SOAT1P35610 550 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 PKNOX1P55347 436 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 ATPAF2Q8N5M1 289 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 ZBTB8BQ8NAP8 495 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 PPP1R10Q96QC0 940 aaKnown RBP13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 PHACTR1Q9C0D0 580 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 C3orf18Q9UK00 162 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 UMODL1Q5DID0 1318 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 FAM205CA6NFA0 338 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 TSPAN19P0C672 248 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 MAPK1P28482 360 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 RPS7P62081 194 aaKnown RBP13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 PSMC5P62195 406 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 STX4Q12846 297 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 SMTNL2Q2TAL5 461 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 SBK1Q52WX2 424 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 N4BP2L1Q5TBK1 243 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 CDC73Q6P1J9 531 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 ERICH5Q6P6B1 374 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 CATSPER4Q7RTX7 472 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 ZBTB46Q86UZ6 589 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 PDPRQ8NCN5 879 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 FAM13CQ8NE31 585 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 PCDH9Q9HC56 1237 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 MTMR4Q9NYA4 1195 aa13.47□□□□□ -0.25
PCDHGA3-201ENST00000253812 ARHGEF28Q8N1W1 1705 aaKnown RBP13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 A0A1W2PQ72 361 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 ETS1P14921 441 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 FEN1P39748 380 aaKnown RBP13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 RXRGP48443 463 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 ACLYP53396 1101 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 WDR72Q3MJ13 1102 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 PPP1R15BQ5SWA1 713 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 LIN54Q6MZP7 749 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 CASP12Q6UXS9 341 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 ADHFE1Q8IWW8 467 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 EXD1Q8NHP7 514 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 MCFD2Q8NI22 146 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 DQX1Q8TE96 717 aaKnown RBP13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 TEKT5Q96M29 485 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 GPATCH1Q9BRR8 931 aaKnown RBP13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 LIMD1Q9UGP4 676 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 FBXO40Q9UH90 709 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 POLG2Q9UHN1 485 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 MROH1Q8NDA8 1641 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 KLHL33A6NCF5 533 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 PSMD4P55036 377 aaKnown RBP13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 LSM3P62310 102 aaKnown RBP13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 SLC25A3Q00325 362 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 TBX2Q13207 712 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 FAM228AQ86W67 206 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 BPIFB6Q8NFQ5 453 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 HTRA1Q92743 480 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 MYLPFQ96A32 169 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 FOPNLQ96NB1 174 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 SPATA16Q9BXB7 569 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 SPASTQ9UBP0 616 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 ZNRF3Q9ULT6 936 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 REREQ9P2R6 1566 aa13.46□□□□□ -0.25
PCDHGA3-201ENST00000253812 LGR5O75473 907 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZNF806P0C7X5 589 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 PRKAR1AP10644 381 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 FDPSP14324 419 aaKnown RBP13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 FOSL2P15408 326 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 PHKA2P46019 1235 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 RAP1GAPP47736 663 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 GMFBP60983 142 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 BMPR2Q13873 1038 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 SNRNP35Q16560 246 aaKnown RBP13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 FAXCQ5TGI0 409 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 CHMP1BQ7LBR1 199 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 RAB43Q86YS6 212 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 ITFG1Q8TB96 612 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 PIWIL2Q8TC59 973 aaKnown RBP13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 SH3TC2Q8TF17 1288 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 FIG4Q92562 907 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 DCUN1D1Q96GG9 259 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 TNIP3Q96KP6 325 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 NUDT12Q9BQG2 462 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 SMARCAD1Q9H4L7 1026 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 ELOVL6Q9H5J4 265 aa13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 KRCC1Q9NPI7 259 aaPredicted RBP13.46□□□□□ -0.26
PCDHGA3-201ENST00000253812 VPS45Q9NRW7 570 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms