RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ZNF778Q96MU6 729 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 ZNF408Q9H9D4 720 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 CAPN14A8MX76 684 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 MMP3P08254 477 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 BCAT1P54687 386 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 HIC1Q14526 733 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 MUM1Q2TAK8 710 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 ANO7Q6IWH7 933 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 HFE2Q6ZVN8 426 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 NT5DC4Q86YG4 428 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.32■■□□□ 1.8
RAB40C-201ENST00000248139 OR6J1Q8NGC5 347 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 ARNTL2Q8WYA1 636 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 SHCBP1LQ9BZQ2 653 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 SNX25Q9H3E2 840 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 PLXNA1Q9UIW2 1896 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 HNRNPCL1O60812 293 aaKnown RBP26.31■■□□□ 1.8
RAB40C-201ENST00000248139 ARL4AP40617 200 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 PDE1CQ14123 709 aaPredicted RBP26.31■■□□□ 1.8
RAB40C-201ENST00000248139 SNX30Q5VWJ9 437 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 ARHGAP17Q68EM7 881 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 SPDL1Q96EA4 605 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 XPNPEP3Q9NQH7 507 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 SYBUQ9NX95 663 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 PIN4Q9Y237 131 aaKnown RBP26.31■■□□□ 1.8
RAB40C-201ENST00000248139 A0A0A0MRY4 1105 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 SMIM28A0A1B0GU29 152 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 DGKIO75912 1065 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 AMHP03971 560 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 DCAF4L1Q3SXM0 396 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 SLC25A41Q8N5S1 370 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 AZIN2Q96A70 460 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 PGBD4Q96DM1 585 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 SPATA13Q96N96 652 aa26.31■■□□□ 1.8
RAB40C-201ENST00000248139 XAB2Q9HCS7 855 aaKnown RBP26.31■■□□□ 1.8
RAB40C-201ENST00000248139 GPR32O75388 356 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 PACS1Q6VY07 963 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 DPP9Q86TI2 863 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 OSTM1Q86WC4 334 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 DNAJC9Q8WXX5 260 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 THTPAQ9BU02 230 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 OSBPL1AQ9BXW6 950 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 PRDM12Q9H4Q4 367 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 FZD10Q9ULW2 581 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 ZSWIM8A7E2V4 1837 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 SNNO75324 88 aaPredicted RBP26.3■■□□□ 1.8
RAB40C-201ENST00000248139 PSMG1O95456 288 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 NR2C2P49116 596 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 OTUD1Q5VV17 481 aaPredicted RBP26.3■■□□□ 1.8
RAB40C-201ENST00000248139 RSPH3Q86UC2 560 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 RNF169Q8NCN4 708 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 MTBPQ96DY7 904 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 OLFM3Q96PB7 478 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 TUBB6Q9BUF5 446 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 VTA1Q9NP79 307 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 DNAJC16Q9Y2G8 782 aa26.3■■□□□ 1.8
RAB40C-201ENST00000248139 FAM72CH0Y354 149 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 FAM72AQ5TYM5 149 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 FAM72DQ6L9T8 149 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 CMC1Q7Z7K0 106 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 FAM72BQ86X60 149 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 HACE1Q8IYU2 909 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 POU5F2Q8N7G0 328 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 DNAJB3Q8WWF6 145 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 GCOM2Q9BZD3 368 aaPredicted RBP26.29■■□□□ 1.8
RAB40C-201ENST00000248139 ACSS2Q9NR19 701 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.29■■□□□ 1.8
RAB40C-201ENST00000248139 SMNDC1O75940 238 aaKnown RBP eCLIP26.29■■□□□ 1.8
RAB40C-201ENST00000248139 ARRB2P32121 409 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 TUBP50607 506 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 VWA5B1Q5TIE3 1220 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 UNC93AQ86WB7 457 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 ZDHHC17Q8IUH5 632 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 LRRC52Q8N7C0 313 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 PLEKHA5Q9HAU0 1116 aa26.29■■□□□ 1.8
RAB40C-201ENST00000248139 SDR42E2A6NKP2 422 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 M0QYT0 321 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 DYNC1LI2O43237 492 aaPredicted RBP26.28■■□□□ 1.8
RAB40C-201ENST00000248139 ZFXP17010 805 aaPredicted RBP26.28■■□□□ 1.8
RAB40C-201ENST00000248139 PGGT1BP53609 377 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 BLMHQ13867 455 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 ZNF410Q86VK4 478 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 ZNF567Q8N184 647 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 RNF139Q8WU17 664 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 MOCOSQ96EN8 888 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 BATF3Q9NR55 127 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 DONSONQ9NYP3 566 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 COL1A2P08123 1366 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 PDHXO00330 501 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 IL1BP01584 269 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 MATKP42679 507 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 MXRA7P84157 204 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 PDE1BQ01064 536 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 NOTUMQ6P988 496 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 ALKAL1Q6UXT8 129 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 WWP1Q9H0M0 922 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 ANLNQ9NQW6 1124 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 PNPOQ9NVS9 261 aa26.28■■□□□ 1.8
RAB40C-201ENST00000248139 NVLO15381 856 aaKnown RBP26.27■■□□□ 1.8
RAB40C-201ENST00000248139 NEBLO76041 1014 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms