RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 VAPBO95292 243 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 SGPL1O95470 568 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 PCNAP12004 261 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 KCNQ4P56696 695 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 PSME3P61289 254 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 TLR1Q15399 786 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 ZYXQ15942 572 aaKnown RBP13.18□□□□□ -0.3
VAMP4-201ENST00000236192 DGKDQ16760 1214 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 PPP1R18Q6NYC8 613 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 ALG3Q92685 438 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 ZNF486Q96H40 463 aaPredicted RBP13.18□□□□□ -0.3
VAMP4-201ENST00000236192 VPS35Q96QK1 796 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 REEP2Q9BRK0 252 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 COQ10BQ9H8M1 238 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 KLHL3Q9UH77 587 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 FRMPD1Q5SYB0 1578 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 FSCN2O14926 492 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 FAM20BO75063 409 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 INHBCP55103 352 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 POU5F1BQ06416 359 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 DNASE1L3Q13609 305 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 KCNJ8Q15842 424 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 ASTE1Q2TB18 679 aaPredicted RBP13.18□□□□□ -0.3
VAMP4-201ENST00000236192 HABP4Q5JVS0 413 aaKnown RBP13.18□□□□□ -0.3
VAMP4-201ENST00000236192 HEATR6Q6AI08 1181 aaKnown RBP13.18□□□□□ -0.3
VAMP4-201ENST00000236192 LRRC55Q6ZSA7 311 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 SLFN11Q7Z7L1 901 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 RMDN3Q96TC7 470 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 HERC2P3Q9BVR0 1158 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 ZDHHC7Q9NXF8 308 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 PCSK1NQ9UHG2 260 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 RNF103O00237 685 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 PDPK1O15530 556 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 TSPAN1O60635 241 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 SERPINB7O75635 380 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 PROSCO94903 275 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 ECHS1P30084 290 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 PPIL2Q13356 520 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 CYP51A1Q16850 503 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 FOXB2Q5VYV0 432 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 TRIQKQ629K1 86 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 APPL2Q8NEU8 664 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 KBTBD8Q8NFY9 601 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 LNX1Q8TBB1 728 aaPredicted RBP13.18□□□□□ -0.3
VAMP4-201ENST00000236192 NXNL1Q96CM4 212 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 MIPEPQ99797 713 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 AIFM2Q9BRQ8 373 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 SRP68Q9UHB9 627 aaKnown RBP13.18□□□□□ -0.3
VAMP4-201ENST00000236192 JAG2Q9Y219 1238 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 MST1RQ04912 1400 aa13.18□□□□□ -0.3
VAMP4-201ENST00000236192 PNMA6FA0A0J9YX94 578 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 KRBA1A5PL33 1030 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 TMCC2O75069 709 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 SOX11P35716 441 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 GPC3P51654 580 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 PRKAA2P54646 552 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 KCNK10P57789 538 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 TFDP3Q5H9I0 405 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 HERC6Q8IVU3 1022 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 OR8H1Q8NGG4 311 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 ZNF347Q96SE7 839 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 SLC30A1Q9Y6M5 507 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 E2F8A0AVK6 867 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 RBP3P10745 1247 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 ATP6V1B2P21281 511 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 HSPA2P54652 639 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 FOXO4P98177 505 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 PRKAA1Q13131 559 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 DGCR6Q14129 220 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 AGKQ53H12 422 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 GLRA4Q5JXX5 417 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 STX12Q86Y82 276 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 VPS37AQ8NEZ2 397 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 ASZ1Q8WWH4 475 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 ARMC1Q9NVT9 282 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 QPCTLQ9NXS2 382 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 SPATA2Q9UM82 520 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 ABCC6O95255 1503 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 ISPDA4D126 451 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 KATNA1O75449 491 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 TOMM70O94826 608 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 IFI30P13284 250 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 IL6STP40189 918 aaPredicted RBP13.17□□□□□ -0.3
VAMP4-201ENST00000236192 GRIA3P42263 894 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 XKR9Q5GH70 373 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 CCNYL2Q5T2Q4 361 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 KRT73Q86Y46 540 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
VAMP4-201ENST00000236192 FEZF2Q8TBJ5 459 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 SPATA18Q8TC71 538 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 FAM162AQ96A26 154 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 PPP1R10Q96QC0 940 aaKnown RBP13.17□□□□□ -0.3
VAMP4-201ENST00000236192 TMEM245Q9H330 911 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 SACM1LQ9NTJ5 587 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 KBTBD13C9JR72 458 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 INO80B-WBP1J3KQ70 363 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 APOL1O14791 398 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 MRASO14807 208 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 MAGP20916 626 aa13.17□□□□□ -0.3
VAMP4-201ENST00000236192 GRM1Q13255 1194 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms