RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TUBP50607 506 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 TBX4P57082 545 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 RRP1BQ14684 758 aaKnown RBP11.8□□□□□ -0.52
NOD1-201ENST00000222823 RIOX2Q8IUF8 465 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 LZTR1Q8N653 840 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 LRRC15Q8TF66 581 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 PLEKHA8Q96JA3 519 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 YME1L1Q96TA2 773 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 GAD1Q99259 594 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 PIH1D1Q9NWS0 290 aaKnown RBP11.8□□□□□ -0.52
NOD1-201ENST00000222823 PCDHAC2Q9Y5I4 1007 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 CHD4Q14839 1912 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 MANSC4A6NHS7 340 aaPredicted RBP11.8□□□□□ -0.52
NOD1-201ENST00000222823 ERI2A8K979 691 aaKnown RBP11.8□□□□□ -0.52
NOD1-201ENST00000222823 YBX3P16989 372 aaKnown RBP eCLIP11.8□□□□□ -0.52
NOD1-201ENST00000222823 KCNA4P22459 653 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 SOAT1P35610 550 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 PSEN2P49810 448 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 TJAP1Q5JTD0 557 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 KATNAL2Q8IYT4 538 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 TNIP2Q8NFZ5 429 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 PGM2Q96G03 612 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 PGLYRP2Q96PD5 576 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 SH3GL2Q99962 352 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 CAAP1Q9H8G2 361 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 TRHDEQ9UKU6 1024 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 DTNAQ9Y4J8 743 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 MROH7Q68CQ1 1323 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 RNF103O00237 685 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 TOMM70O94826 608 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 PSMA4P25789 261 aaKnown RBP11.8□□□□□ -0.52
NOD1-201ENST00000222823 PRIM2P49643 509 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 EPHB3P54753 998 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 CYLC2Q14093 348 aaPredicted RBP11.8□□□□□ -0.52
NOD1-201ENST00000222823 ZNF284Q2VY69 593 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 FUT11Q495W5 492 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 N4BP2L1Q5TBK1 243 aaPredicted RBP11.8□□□□□ -0.52
NOD1-201ENST00000222823 BNC2Q6ZN30 1099 aaPredicted RBP11.8□□□□□ -0.52
NOD1-201ENST00000222823 HORMAD1Q86X24 394 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 SHC3Q92529 594 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 NMRK1Q9NWW6 199 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 IRF6O14896 467 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 MT-CO1P00395 513 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 ADRB2P07550 413 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 TPBGLP0DKB5 382 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 CNGA2Q16280 664 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 GALNTL6Q49A17 601 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 FAM171A1Q5VUB5 890 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 EMILIN2Q9BXX0 1053 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 CIPCQ9C0C6 399 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 MYH15Q9Y2K3 1946 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 PRR23AA6NEV1 266 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 TRIM13O60858 407 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 ATP9AO75110 1047 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 LTFP02788 710 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 ATP6V1B1P15313 513 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 EPB42P16452 691 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 DNAJB2P25686 324 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 MGAT1P26572 445 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 RBL1P28749 1068 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 OR1E1P30953 314 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 PKN2Q16513 984 aaKnown RBP11.79□□□□□ -0.52
NOD1-201ENST00000222823 FAM71AQ8IYT1 594 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 SENP8Q96LD8 212 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 SERPINB11Q96P15 392 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 ELOVL4Q9GZR5 314 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 RXFP1Q9HBX9 757 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 XPNPEP3Q9NQH7 507 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 SELENONQ9NZV5 590 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 ROBO1Q9Y6N7 1651 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 F8W810 466 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 XPO1O14980 1071 aaKnown RBP11.79□□□□□ -0.52
NOD1-201ENST00000222823 KDM1AO60341 852 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 VAPBO95292 243 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 ARIH2O95376 493 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 OCM2P0CE71 109 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 OCMP0CE72 109 aaPredicted RBP11.79□□□□□ -0.52
NOD1-201ENST00000222823 FSCN1Q16658 493 aaKnown RBP11.79□□□□□ -0.52
NOD1-201ENST00000222823 COPS5Q92905 334 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 PRKD2Q9BZL6 878 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 ATXN3LQ9H3M9 355 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 EXOSC4Q9NPD3 245 aaKnown RBP11.79□□□□□ -0.52
NOD1-201ENST00000222823 SCN3BQ9NY72 215 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 TAGLN3Q9UI15 199 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 APPL1Q9UKG1 709 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 ITM2BQ9Y287 266 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 MYH8P13535 1937 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 ANKRD36CQ5JPF3 1778 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 ZMYM2Q9UBW7 1377 aa11.79□□□□□ -0.52
NOD1-201ENST00000222823 hCG_2014768A0A024R1R8 64 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 A0A096LPK6 155 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 DDHD2O94830 711 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 KDELR1P24390 212 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 PTPN4P29074 926 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 ARL4DP49703 201 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 NME5P56597 212 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 CHRNB3Q05901 458 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 DEFB128Q7Z7B8 93 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 KIAA0319LQ8IZA0 1049 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 IL31RAQ8NI17 732 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms