RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Olfr392Q7TRX6 312 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Smndc1Q8BGT7 238 aaKnown RBP18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Mettl21cQ8BLU2 248 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ccdc159Q8C963 411 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Arhgap29Q8CGF1 1266 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ago3Q8CJF9 860 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ssh3Q8K330 649 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Rpa3Q9CQ71 121 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Wfdc1Q9ESH5 211 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Dclre1aQ9JIC3 1026 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Capn7Q9R1S8 813 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ror1Q9Z139 937 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Arih2Q9Z1K6 492 aa18.85■□□□□ 0.61
Trim47-202ENSMUST00000106441 Kntc1Q8C3Y4 2207 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Arid2E9Q7E2 1828 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Dock3Q8CIQ7 2027 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Gm13941A2AJ38 245 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Gm12394A2AKP6 982 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 1700064H15RikD3Z4D4 81 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Spin2fJ3QPU0 254 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Cd72P21855 354 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ndufs6P52503 116 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Cdh8P97291 799 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Gpsm3Q3U1Z5 159 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Mrgprx2Q3UG50 352 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Eif2dQ61211 570 aaKnown RBP18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Slc26a2Q62273 739 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ccnt2Q7TQK0 723 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Tubgcp5Q8BKN5 1024 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Olfr615Q8VGY4 313 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ogfod2Q9CQ04 349 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Dtwd1Q9D8U7 304 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Scyl3Q9DBQ7 735 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Capn10Q9ESK3 666 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 Krt16Q9Z2K1 469 aa18.84■□□□□ 0.61
Trim47-202ENSMUST00000106441 NumblO08919 604 aa18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ift81O35594 676 aa18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 Grb7Q03160 535 aa18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 Col19a1Q0VF58 1136 aa18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 Alkbh5Q3TSG4 395 aaKnown RBP18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 Parp3Q3ULW8 533 aa18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 Tars2Q3UQ84 723 aaKnown RBP18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 Sult1d1Q3UZZ6 295 aa18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 Cage1Q5IR70 849 aa18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ttc39bQ8BYY4 617 aa18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 Taf7lQ9D3R9 471 aa18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 HemgnQ9ERZ0 503 aa18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 ParvbQ9ES46 365 aa18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 Dnajb7Q9QYI8 312 aa18.83■□□□□ 0.61
Trim47-202ENSMUST00000106441 Tcp11x2A2AEI7 503 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 D3Z070 196 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Ranbp9P69566 653 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Serpina6Q06770 397 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 McuQ3UMR5 350 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Pld5Q3UNN8 536 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Gm29609Q3UU56 907 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 P3h1Q3V1T4 739 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Grik1Q60934 836 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 2700097O09RikQ6PGK3 301 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Rbm12b1Q80YR9 836 aaKnown RBP18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Gtf3c2Q8BL74 907 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Rmnd1Q8CI78 450 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Kct2Q8K201 259 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Olfr809Q8VEX8 328 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Tekt2Q922G7 430 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Lrp8Q924X6 996 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Clstn3Q99JH7 956 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Trim42Q9D2H5 723 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Polr3cQ9D483 533 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Ccdc103Q9D9P2 237 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Trim54Q9ERP3 366 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Cul3Q9JLV5 768 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 DgkeQ9R1C6 564 aa18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Wdr46Q9Z0H1 622 aaKnown RBP18.83■□□□□ 0.6
Trim47-202ENSMUST00000106441 Kif6E9PX57 802 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Pgk1P09411 417 aaKnown RBP18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Rab17P35292 214 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Klf1P46099 358 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Ppp1r13lQ5I1X5 824 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Capn11Q6J756 714 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 RfflQ6ZQM0 377 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Olfr1505Q7TQQ2 316 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Anapc5Q8BTZ4 740 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Svs3bQ8BZH8 265 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Kat2aQ9JHD2 830 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Aldh18a1Q9Z110 795 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Tnfrsf11bO08712 401 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Nek2O35942 443 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Znf746Q3U133 652 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Snx25Q3ZT31 840 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Cand1Q6ZQ38 1230 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Got1l1Q7TSV6 404 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Nudcd3Q8R1N4 363 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Nsmce3Q9CPR8 279 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Magel2Q9QZ04 1284 aa18.82■□□□□ 0.6
Trim47-202ENSMUST00000106441 Obsl1D3YYU8 1804 aaKnown RBP18.81■□□□□ 0.6
Trim47-202ENSMUST00000106441 Vmn2r17E9PYF5 849 aa18.81■□□□□ 0.6
Trim47-202ENSMUST00000106441 Gm17535J3KMR8 224 aa18.81■□□□□ 0.6
Trim47-202ENSMUST00000106441 Pold2O35654 469 aa18.81■□□□□ 0.6
Trim47-202ENSMUST00000106441 Chil3O35744 398 aa18.81■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms