RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Sult2a7A0A1B0GRF0 313 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Slfn9B1ARD6 910 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Eif3dO70194 548 aaKnown RBP16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Rad54lP70270 747 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 4930502E18RikQ14BQ3 236 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Brip1Q5SXJ3 1174 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Nab1Q61122 486 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Slc26a2Q62273 739 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Olfr293Q7TS10 336 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 EmsyQ8BMB0 1264 aaKnown RBP16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Mark4Q8CIP4 752 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Prpf39Q8K2Z2 665 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Gprc5bQ923Z0 410 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Epm2aQ9WUA5 330 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Yeats2Q3TUF7 1407 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 4921501E09RikA0A0R4J054 908 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Clk4O35493 481 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Mars2Q499X9 586 aaKnown RBP16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Nxpe4Q52KP5 543 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Kcna5Q61762 602 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Arhgap15Q811M1 481 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Pdk1Q8BFP9 434 aaKnown RBP16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Q8BH50 245 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Colgalt1Q8K297 617 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Cnot6Q8K3P5 557 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Pcdhb11Q91UZ8 797 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Cog2Q921L5 731 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Slc26a5Q99NH7 744 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Sfmbt1Q9JMD1 863 aa16.79■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Slc4a5E9Q3M5 1116 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 AfmO89020 608 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Rasa2P58069 847 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Myl12bQ3THE2 172 aaKnown RBP16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Bnc2Q8BMQ3 1127 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Cyp2d12Q8BVD2 504 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Chst15Q91XQ5 561 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Exosc4Q921I9 245 aaKnown RBP16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 CsadQ9DBE0 493 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Paqr5Q9DCU0 330 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Plod3Q9R0E1 741 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Zscan4bE9Q3G0 505 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Speer4eK7N6S8 255 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Vmn2r77L7N2B7 854 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Hipk1O88904 1210 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 LxnP70202 222 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Shox2P70390 331 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Erbb2P70424 1256 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Frg1P97376 258 aaKnown RBP16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Cyp2j11Q3UNV2 504 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Slc9b2Q5BKR2 547 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Zc3h10Q8R205 435 aaKnown RBP16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 MipepA6H611 711 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Ildr2B5TVM2 661 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Atf6F6VAN0 656 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Gng2P63213 71 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Stmnd1Q6P3A1 279 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 AW551984Q8BGF0 804 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Znf428Q8C1M2 176 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Trim52Q8CDV4 233 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Smco1Q8CEZ1 214 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 BfarQ8R079 450 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Sult6b2B7ZWN4 290 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Olfr521E9Q519 321 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Bnc1O35914 961 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Znf112Q0VAW7 879 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Gm3414Q3TNU4 584 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Otud5Q3U2S4 566 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 E2f5Q61502 335 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 SvopQ8BFT9 548 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Lig4Q8BTF7 911 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Slc9b1Q8C0X2 565 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Mrpl1Q99N96 336 aaKnown RBP16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Rwdd4Q9CPR1 188 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 S100pbpQ9D5K4 396 aa16.78■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Zscan4eA0A1B0GRE8 505 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Gm8444F6XS56 118 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 TpteG5E8H5 664 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Adam7O35227 789 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 S100a1P56565 94 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Scarf2P59222 833 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Klhl35Q9CZ49 574 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Gm28363A0A087WQW2 129 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Map2k3O09110 347 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Dhx33Q80VY9 698 aaKnown RBP16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Fbxw7Q8VBV4 629 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 DgkgQ91WG7 788 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Fxr2Q9WVR4 673 aaKnown RBP16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Cyp2a22B2RXZ2 492 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Sult1e1P49891 295 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Idi1P58044 227 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 MogQ61885 246 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Tmed3Q78IS1 221 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Olfml2aQ8BHP7 681 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 SntnQ8C9X1 147 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Pih1d2Q8CHR9 315 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Fam20aQ8CID3 541 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Tnfaip8l2Q9D8Y7 184 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Cul7Q8VE73 1689 aa16.77■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Rap1gapA2ALS5 663 aa16.77■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Rrm1P07742 792 aa16.77■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms