RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Ddx31Q6NZQ2 687 aaKnown RBP9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Cpa4Q6P8K8 420 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Bnip1Q6QD59 228 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ppp2r1aQ76MZ3 589 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Nucks1Q80XU3 234 aaKnown RBP9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Dyrk4Q8BI55 632 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Cpsf7Q8BTV2 471 aaKnown RBP9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Fem1cQ8CEF1 617 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pnpla8Q8K1N1 776 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gprc6aQ8K4Z6 928 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Slc8a2Q8K596 921 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Sf3b4Q8QZY9 424 aaKnown RBP9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Dync1li1Q8R1Q8 523 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pcdha11Q91Y19 950 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 ArhgdiaQ99PT1 204 aaKnown RBP9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ndufaf1Q9CWX2 328 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 4933436I01RikQ9D3T1 429 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Cmtm2bQ9DAC0 210 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Crim1Q9JLL0 1037 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Cetn2Q9R1K9 172 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ptpn4Q9WU22 926 aa9.37□□□□□ -0.91
Upf3b-201ENSMUST00000076265 CoblQ5NBX1 1337 aaKnown RBP9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gm13420A0A140LJJ2 248 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mtg2A2AFK4 405 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Taf4E9QAP7 1042 aaKnown RBP9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Dnajb6O54946 365 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ulk1O70405 1051 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 AfmO89020 608 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ccr4P51680 360 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 JrkQ60976 557 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ddr2Q62371 854 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Atp2a3Q64518 1038 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ankrd6Q69ZU8 712 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rad54bQ6PFE3 886 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Arhgap19Q8BRH3 494 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Stx16Q8BVI5 326 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Svs3bQ8BZH8 265 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 DutQ8VCG1 200 aaKnown RBP9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Atp6v0a4Q920R6 833 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Slc5a2Q923I7 670 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Msantd3Q9CR78 275 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Htra1Q9R118 480 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Nlrp5Q9R1M5 1163 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rnf19bA2A7Q9 732 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Zscan18E9PUD6 809 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mapk12O08911 367 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Myf5P24699 255 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Nf2P46662 596 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 RalaP63321 206 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Cry1P97784 606 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 NfkbidQ2TB02 327 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 InipQ3TXT3 104 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pank2Q3U4S0 443 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Eml4Q3UMY5 988 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ubtfl1Q3USZ2 394 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mtmr11Q3V1L6 700 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Klri2Q5DT36 248 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ostf1Q62422 215 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ccdc25Q78PG9 208 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Sdad1Q80UZ2 687 aaKnown RBP9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Slc26a11Q80ZD3 593 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Zdhhc15Q8BGJ0 337 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Bmp3Q8BHE5 468 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rbm4Q8C7Q4 361 aaKnown RBP9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Calcoco1Q8CGU1 691 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pms1Q8K119 917 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Klf11Q8K1S5 502 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rbm4bQ8VE92 357 aaKnown RBP9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Klc3Q91W40 508 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 HypkQ9CR41 129 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Creb3l4Q9D2A5 370 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Phf6Q9D4J7 364 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Efhd2Q9D8Y0 240 aaKnown RBP9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pdzd9Q9D9M4 266 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Anxa9Q9JHQ0 345 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ppp2r3cQ9JK24 453 aa9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 SmapQ9R0P4 181 aaKnown RBP9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mecp2Q9Z2D6 484 aaKnown RBP9.36□□□□□ -0.91
Upf3b-201ENSMUST00000076265 A730046J19RikA0A1B0GSN8 89 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mageb4A2A9R3 556 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tex28B1AYN9 409 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Dlgap4B1AZP2 992 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Triml2E9PW10 424 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 TazI7HJS2 263 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Kcnj15O88932 375 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Cyp1a2P00186 513 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 FynP39688 537 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Sept1P42209 366 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Syt2P46097 422 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Abcd3P55096 659 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Map4k1P70218 827 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Trim72Q1XH17 477 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rcsd1Q3UZA1 412 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Shroom1Q5SX79 823 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Adam9Q61072 845 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Galnt2Q6PB93 570 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 CebpeQ6PZD9 281 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ccsmst1Q6RUT7 136 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Insig1Q8BGI3 259 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Klhl26Q8BGY4 606 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms