RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 PollQ9QXE2 573 aaKnown RBP10.07□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ces1bD3Z5G7 567 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Vmn1r39G3UWE6 305 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ccnd1P25322 295 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Hmgcs2P54869 508 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Fermt1P59113 677 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 B3gntl1Q3U129 357 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Gm10392Q3V3I3 114 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pdp2Q504M2 532 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Exoc3l4Q6DIA2 721 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Zbtb5Q7TQG0 670 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Olfr533Q7TRT7 320 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Sec24bQ80ZX0 1251 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Bmt2Q8BXK4 403 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Snx15Q91WE1 337 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Glra3Q91XP5 464 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Stk33Q924X7 491 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Homer3Q99JP6 356 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Mrps17Q9CQE3 120 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Dis3Q9CSH3 958 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 RalbQ9JIW9 206 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Hey2Q9QUS4 339 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 PignQ9R1S3 931 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Fibcd1A2AV25 459 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Adamts6D3Z1A5 1117 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Gm28043E0CXC2 719 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Zfp946F6VWU8 523 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 EsrraO08580 422 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Krt10P02535 570 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Hoxb8P09632 243 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Rpl5P47962 297 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Atp9bP98195 1146 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Gemin4Q6P6L6 1058 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Stk40Q7TNL3 435 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Gramd1bQ80TI0 738 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Mettl24Q8CCB5 363 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Dedd2Q8QZV0 330 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Nup85Q8R480 656 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Sh3kbp1Q8R550 709 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pex6Q99LC9 981 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Rec114Q9CWH4 259 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Thg1lQ9CY52 298 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Tubgcp4Q9D4F8 667 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Plin3Q9DBG5 437 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Rmdn1Q9DCV4 305 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Tmem115Q9WUH1 350 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Gm7086A0A1W2P766 342 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Olfr67F8VPJ8 320 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Prim2P33610 505 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Asgr1P34927 284 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Scg3P47867 471 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 NyxP83503 476 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Tcaf3Q6QR59 914 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Echs1Q8BH95 290 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 SybuQ8BHS8 665 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Plin5Q8BVZ1 463 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 PdgfcQ8CI19 345 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pcdhb18Q91Y02 792 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Zfp64Q99KE8 643 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Dcp2Q9CYC6 422 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Wars2Q9CYK1 360 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Trim42Q9D2H5 723 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Serpinb9bQ9DAV6 377 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 QkiQ9QYS9 341 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Dnajc12Q9R022 198 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Rbck1Q9WUB0 508 aa10.06□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 NinQ61043 2035 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pcna-ps2A0A140T8V5 261 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Vmn2r87E9PZX4 848 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Plekha5E9Q6H8 1269 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 PcnaP17918 261 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Otud5Q3U2S4 566 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Rbm20Q3UQS8 1199 aaKnown RBP10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Adrbk2Q3UYH7 688 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Fbxw2Q60584 422 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Zfp943Q6NZP4 507 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Celf6Q7TN33 460 aaKnown RBP10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Clec4b1Q7TS58 209 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 AA792892Q8C6S1 278 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 GsdmcQ99NB5 468 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Trem2Q99NH8 227 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pih1d1Q9CQJ2 290 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Akr1c12Q9JLI0 323 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Mindy4b-psA0A1W2P7H6 457 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Fbxl18E9PYR1 771 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Zfp651E9PZ11 729 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Rad51ap2G3UW63 976 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Mfsd4b4J3QNS5 503 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Kng1O08677 661 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 PtgisO35074 501 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Acot1O55137 419 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Crhr1P35347 415 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Arl4aP61213 200 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Abce1P61222 599 aaKnown RBP10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 IhhP97812 411 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Adcy6Q01341 1165 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Fam83hQ148V8 1209 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Q14AM7 275 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Hexim2Q3TVI4 313 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Papd5Q68ED3 633 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms