RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 SYTL3Q4VX76 610 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 SLC45A4Q5BKX6 768 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 FAM171A1Q5VUB5 890 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 CES3Q6UWW8 571 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 NUDT18Q6ZVK8 323 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 IQCKQ8N0W5 287 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 TEX9Q8N6V9 391 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 ANKRD52Q8NB46 1076 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 FOPNLQ96NB1 174 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 TLR8Q9NR97 1041 aaKnown RBP18.05■□□□□ 0.48
SCARB2-223ENST00000640640 PKD2L2Q9NZM6 624 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 ENDOD1O94919 500 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 IFNA8P32881 189 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 SNED1Q8TER0 1413 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 LENG9Q96B70 501 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 RUBCNLQ9H714 662 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 TBC1D13Q9NVG8 400 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 DMAC2Q9NW81 257 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 ATRNL1Q5VV63 1379 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 RAMP2O60895 175 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 TRUB2O95900 331 aaKnown RBP18.04■□□□□ 0.48
SCARB2-223ENST00000640640 ITGA9Q13797 1035 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 MTFR1Q15390 333 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 RASGEF1CQ8N431 466 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 ETNK2Q9NVF9 386 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 IRAK4Q9NWZ3 460 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 ZNF212Q9UDV6 495 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 TMEM191CA6NGB0 347 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 RHOCP08134 193 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 PGAM1P18669 254 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 CSHL1Q14406 222 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 POLD3Q15054 466 aaPredicted RBP18.04■□□□□ 0.48
SCARB2-223ENST00000640640 IL1RL2Q9HB29 575 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 PDE4DIPQ5VU43 2346 aa18.04■□□□□ 0.48
SCARB2-223ENST00000640640 B4GALT4O60513 344 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 H2AFYO75367 372 aaKnown RBP18.03■□□□□ 0.48
SCARB2-223ENST00000640640 VPS26AO75436 327 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 DNAJC8O75937 253 aaPredicted RBP18.03■□□□□ 0.48
SCARB2-223ENST00000640640 CST3P01034 146 aaPredicted RBP18.03■□□□□ 0.48
SCARB2-223ENST00000640640 ITGAVP06756 1048 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 B3GALNT2Q8NCR0 500 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 TUBGCP3Q96CW5 907 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.03■□□□□ 0.48
SCARB2-223ENST00000640640 SNX5Q9Y5X3 404 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 SYCE1LA8MT33 242 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 SERPINF2P08697 491 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 THRAP10827 490 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 MAP2K5Q13163 448 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 FLOT2Q14254 428 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 PTAR1Q7Z6K3 402 aaPredicted RBP18.03■□□□□ 0.48
SCARB2-223ENST00000640640 KCNMB4Q86W47 210 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 VAT1Q99536 393 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 YY1AP1Q9H869 796 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 CD248Q9HCU0 757 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 ERVK-5Q9HDB9 667 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 AAASQ9NRG9 546 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 GID8Q9NWU2 228 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 NUDT5Q9UKK9 219 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 KIF13AQ9H1H9 1805 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 TRDMT1O14717 391 aaKnown RBP18.03■□□□□ 0.48
SCARB2-223ENST00000640640 PEX10O60683 326 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 RBP1P09455 135 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 SOX11P35716 441 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 SERPINB5P36952 375 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 GRM5P41594 1212 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 SCNN1BP51168 640 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 JAM2P57087 298 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 MMRN1Q13201 1228 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 CYTH1Q15438 398 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 RFWD2Q8NHY2 731 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 ZNF75CPQ92670 426 aaPredicted RBP18.03■□□□□ 0.48
SCARB2-223ENST00000640640 CCDC90BQ9GZT6 254 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 RNPEPQ9H4A4 650 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 BATF3Q9NR55 127 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 VPS28Q9UK41 221 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 MYH2Q9UKX2 1941 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 CBX4O00257 560 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 PGK1P00558 417 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 C4BPAP04003 597 aaKnown RBP18.03■□□□□ 0.48
SCARB2-223ENST00000640640 URODP06132 367 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 KCNK10P57789 538 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 CDK16Q00536 496 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 RCN1Q15293 331 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 LRRC52Q8N7C0 313 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 FAR2Q96K12 515 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 PWWP2AQ96N64 755 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 NIFKQ9BYG3 293 aaKnown RBP18.03■□□□□ 0.48
SCARB2-223ENST00000640640 UBXN6Q9BZV1 441 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 ATXN3LQ9H3M9 355 aa18.03■□□□□ 0.48
SCARB2-223ENST00000640640 SLIT2O94813 1529 aa18.02■□□□□ 0.48
SCARB2-223ENST00000640640 RASSF10A6NK89 507 aa18.02■□□□□ 0.48
SCARB2-223ENST00000640640 PFDN1O60925 122 aa18.02■□□□□ 0.48
SCARB2-223ENST00000640640 USP2O75604 605 aaPredicted RBP18.02■□□□□ 0.48
SCARB2-223ENST00000640640 FECHP22830 423 aa18.02■□□□□ 0.48
SCARB2-223ENST00000640640 CSE1LP55060 971 aaKnown RBP18.02■□□□□ 0.48
SCARB2-223ENST00000640640 TTLL9Q3SXZ7 439 aa18.02■□□□□ 0.48
SCARB2-223ENST00000640640 AARS2Q5JTZ9 985 aaKnown RBP18.02■□□□□ 0.48
SCARB2-223ENST00000640640 UGT3A1Q6NUS8 523 aa18.02■□□□□ 0.48
SCARB2-223ENST00000640640 OLFM3Q96PB7 478 aa18.02■□□□□ 0.48
SCARB2-223ENST00000640640 OR12D3Q9UGF7 316 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms